Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACX73201.1PFAM: Protein of unknown function DUF2283; KEGG: tsi:TSIB_1933 hypothetical protein. (70 aa)    
Predicted Functional Partners:
ACX73202.1
PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: mja:MJ1378 carbamoyl-phosphate synthase, medium subunit (carB1).
       0.710
ACX73199.1
PFAM: protein of unknown function DUF86; KEGG: mja:MJ1380 hypothetical protein.
       0.689
ACX73200.1
PFAM: DNA polymerase beta domain protein region; KEGG: mja:MJ1379 hypothetical protein.
       0.689
ACX73198.1
PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; protein of unknown function DUF201; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; MGS domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: mja:MJ1381 carbamoyl-phosphate synthase, large subunit (carB2).
       0.525
ACX73142.1
PFAM: protein of unknown function DUF499; KEGG: pfu:PF0566 hypothetical protein.
  
     0.514
ACX73140.1
PFAM: protein of unknown function DUF1156; KEGG: pab:PAB0588 hypothetical protein.
  
     0.440
ACX73079.1
TIGRFAM: CRISPR-associated protein, Csm2 family; PFAM: CRISPR-associated protein TM1810 domain protein; KEGG: ton:TON_0894 hypothetical protein.
  
     0.427
Your Current Organism:
Methanocaldococcus vulcanius
NCBI taxonomy Id: 579137
Other names: M. vulcanius M7, Methanocaldococcus vulcanius M7, Methanocaldococcus vulcanius str. M7, Methanocaldococcus vulcanius strain M7
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