STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACX73247.1PFAM: peptidylprolyl isomerase FKBP-type; KEGG: mja:MJ0278 peptidyl-prolyl cis-trans isomerase, FKBP-type rotamase (SlyD). (152 aa)    
Predicted Functional Partners:
ACX72050.1
TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K; KEGG: mja:MJ0442 hydrogenase expression/formation protein (HypB).
    
 
 0.736
ACX71918.1
PFAM: DsrE family protein; SirA family protein; KEGG: mja:MJ0760 hypothetical protein.
     
 0.640
ACX72347.1
KEGG: mja:MJ0515 carbon monoxide dehydrogenase, hydrogenase subunit CooH (CooH); Belongs to the complex I 49 kDa subunit family.
    
 
 0.609
ACX72499.1
KEGG: mja:MJ1027 formate hydrogenlyase, subunit 5.
    
 
 0.609
rps10
Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
  
  
 0.579
rps3ae
PFAM: ribosomal protein S3Ae; KEGG: mja:MJ0980 30S ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family.
   
    0.557
ACX73246.1
PFAM: 4-vinyl reductase 4VR; KEGG: mja:MJ1460 hypothetical protein.
       0.524
rps5
Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy.
  
  
 0.523
tuf
Translation elongation factor EF-1, subunit alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.
   
  
 0.517
fusA
Translation elongation factor aEF-2; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF [...]
  
  
 0.502
Your Current Organism:
Methanocaldococcus vulcanius
NCBI taxonomy Id: 579137
Other names: M. vulcanius M7, Methanocaldococcus vulcanius M7, Methanocaldococcus vulcanius str. M7, Methanocaldococcus vulcanius strain M7
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