STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACX73282.1PFAM: Queuosine synthesis-like; KEGG: mfe:Mefer_0638 queuosine synthesis-like protein. (292 aa)    
Predicted Functional Partners:
ACX73281.1
KEGG: mja:MJ1017 hypothetical protein.
       0.965
ACX72605.1
PFAM: FeoA family protein; KEGG: mja:MJ0567 hypothetical protein.
     
 0.613
ACX73283.1
PFAM: chemotaxis sensory transducer; Rhodanese domain protein; SMART: chemotaxis sensory transducer; Rhodanese domain protein; KEGG: mmp:MMP0413 hypothetical protein.
   
 
 0.607
ACX72604.1
TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: Ferrous iron transport protein B domain protein; GTP-binding protein HSR1-related; nucleoside recognition domain protein; Ferrous iron transport B domain protein; KEGG: mja:MJ0566 ferrous iron transport protein B (FeoB).
     
 0.606
ACX73564.1
PFAM: protein of unknown function UPF0132; KEGG: mja:MJ1527 hypothetical protein.
       0.594
ACX72823.1
KEGG: mja:MJ1136 hypothetical protein; TIGRFAM: histone acetyltransferase, ELP3 family; PFAM: Radical SAM domain protein; GCN5-related N-acetyltransferase; SMART: Elongator protein 3/MiaB/NifB.
   
 
 0.519
ACX72526.1
PFAM: methyltransferase small; KEGG: mfe:Mefer_0857 methyltransferase small.
  
  
 0.509
ACX72693.1
PFAM: Mur ligase middle domain protein; KEGG: mfe:Mefer_0369 Mur ligase middle domain protein.
  
  
 0.498
bioB
Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
  
  
 0.489
ACX72513.1
TIGRFAM: L-seryl-tRNA(Sec) kinase; PFAM: Chromatin associated protein KTI12; KEGG: mfe:Mefer_1539 L-seryl-tRNA(sec) kinase.
   
 
 0.464
Your Current Organism:
Methanocaldococcus vulcanius
NCBI taxonomy Id: 579137
Other names: M. vulcanius M7, Methanocaldococcus vulcanius M7, Methanocaldococcus vulcanius str. M7, Methanocaldococcus vulcanius strain M7
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