STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI37039.1KEGG: mes:Meso_3006 phosphoribosyltransferase. (324 aa)    
Predicted Functional Partners:
AEI37011.1
KEGG: mes:Meso_1356 DNA protecting protein DprA; TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein.
 
 
 0.824
AEI38076.1
KEGG: pla:Plav_3179 ComEC/Rec2-related protein; TIGRFAM: ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein.
 
  
 0.815
AEI38377.1
TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; KEGG: pla:Plav_3594 Mg chelatase, subunit ChlI; SMART: AAA ATPase.
 
  
 0.791
AEI37510.1
KEGG: sml:Smlt2316 flagellar basal body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; Belongs to the flagella basal body rod proteins family.
   
   0.721
recA
recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
 
  
 0.690
AEI37689.1
Arogenate dehydrogenase; KEGG: mes:Meso_3085 cyclohexadienyl dehydrogenase; PFAM: Prephenate dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; TrkA-N domain protein; 6-phosphogluconate dehydrogenase NAD-binding.
   
  
 0.673
AEI37469.1
KEGG: avi:Avi_2270 DNA repair protein; TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC; Belongs to the UPF0758 family.
 
    0.658
AEI38529.1
PFAM: DNA repair protein RadC; KEGG: erg:ERGA_CDS_06660 DNA repair protein RadC-like protein.
 
    0.632
AEI37215.1
TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; KEGG: sml:Smlt4020 putative N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; Amidohydrolase 3.
  
    0.604
AEI37297.1
KEGG: rhi:NGR234_002 Y4aB; TIGRFAM: squalene-associated FAD-dependent desaturase; PFAM: amine oxidase.
  
    0.598
Your Current Organism:
Zymomonas mobilis pomaceae
NCBI taxonomy Id: 579138
Other names: Z. mobilis subsp. pomaceae ATCC 29192, Zymomonas mobilis subsp. pomaceae ATCC 29192, Zymomonas mobilis subsp. pomaceae str. ATCC 29192, Zymomonas mobilis subsp. pomaceae strain ATCC 29192
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