STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI37435.1Regulatory protein RecX; Modulates RecA activity; Belongs to the RecX family. (186 aa)    
Predicted Functional Partners:
recA
recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
  
 
 0.914
radA
DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.
  
  
 0.840
AEI37436.1
PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_3074 AMP-dependent synthetase and ligase.
 
   
 0.739
AEI37277.1
SMART: helicase c2; KEGG: pla:Plav_0430 helicase C2.
  
  
 0.696
AEI38107.1
PFAM: protein of unknown function DUF177; KEGG: bmi:BMEA_A0813 hypothetical protein.
  
     0.663
AEI38049.1
KEGG: rlt:Rleg2_0888 protein of unknown function DUF1491.
  
     0.625
AEI38348.1
KEGG: mlo:mll3886 hypothetical protein.
 
     0.616
AEI38330.1
PFAM: protein of unknown function DUF721; KEGG: rec:RHECIAT_CH0001088 hypothetical protein.
  
     0.593
AEI37024.1
PFAM: N-formylglutamate amidohydrolase; KEGG: mlo:mlr3822 hypothetical protein.
  
     0.581
AEI37805.1
PFAM: protein of unknown function DUF1239; KEGG: atc:AGR_C_586 hypothetical protein.
  
     0.576
Your Current Organism:
Zymomonas mobilis pomaceae
NCBI taxonomy Id: 579138
Other names: Z. mobilis subsp. pomaceae ATCC 29192, Zymomonas mobilis subsp. pomaceae ATCC 29192, Zymomonas mobilis subsp. pomaceae str. ATCC 29192, Zymomonas mobilis subsp. pomaceae strain ATCC 29192
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