STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI37758.1PFAM: ATPase MipZ; KEGG: pla:Plav_2795 ATPase MipZ. (277 aa)    
Predicted Functional Partners:
AEI38070.1
TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: mlo:mll4477 chromosome partitioning protein, ParB; SMART: ParB domain protein nuclease; Belongs to the ParB family.
  
 
 0.746
AEI37201.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: glo:Glov_3556 TonB-dependent receptor plug.
    
   0.652
AEI37648.1
KEGG: pla:Plav_2069 RpsU-divergently transcribed protein; TIGRFAM: rpsU-divergently transcribed protein; PFAM: COQ9 domain protein.
  
     0.621
AEI38520.1
KEGG: pla:Plav_1281 hypothetical protein.
  
     0.570
AEI37756.1
Phosphomannomutase; KEGG: rpk:RPR_00310 phosphomannomutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II.
       0.515
AEI37757.1
PFAM: heat shock protein DnaJ domain protein; KEGG: erw:ERWE_CDS_01370 hypothetical protein.
       0.508
AEI37739.1
TIGRFAM: penicillin-binding protein 2; KEGG: pla:Plav_2482 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain.
  
     0.449
AEI37711.1
Hypothetical protein.
    
   0.446
AEI37819.1
TIGRFAM: type 1 secretion C-terminal target domain; KEGG: pin:Ping_2848 hemagglutinin/hemolysin-related protein.
    
   0.446
topA
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]
     
 0.431
Your Current Organism:
Zymomonas mobilis pomaceae
NCBI taxonomy Id: 579138
Other names: Z. mobilis subsp. pomaceae ATCC 29192, Zymomonas mobilis subsp. pomaceae ATCC 29192, Zymomonas mobilis subsp. pomaceae str. ATCC 29192, Zymomonas mobilis subsp. pomaceae strain ATCC 29192
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