STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI38206.1PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: rhi:NGR234_397 FdxN. (64 aa)    
Predicted Functional Partners:
AEI37218.1
PFAM: cytochrome c1; KEGG: pla:Plav_2244 cytochrome c1.
   
 
 0.986
AEI37220.1
Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.986
AEI37219.1
Cytochrome b/b6 domain protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.963
AEI37550.1
Hypothetical protein; KEGG: dar:Daro_2865 succinate dehydrogenase subunit C.
   
  
 0.957
AEI37660.1
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: xcv:XCV0319 putative vanillate O-demethylase oxidoreductase.
  
 
 0.948
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.930
AEI36960.1
KEGG: avn:Avin_44250 acyl-carrier protein.
   
 0.930
AEI37829.1
PFAM: ATPase, F1 complex, delta/epsilon subunit-like; KEGG: pla:Plav_1466 ATP synthase F1, epsilon subunit.
  
 
 0.885
AEI38124.1
KEGG: pla:Plav_0678 peptidase M16 domain-containing protein; PFAM: peptidase M16 domain protein.
  
   0.867
AEI38532.1
PFAM: peptidase M16 domain protein; KEGG: xcv:XCV0666 putative zinc metalloprotease precursor.
  
   0.867
Your Current Organism:
Zymomonas mobilis pomaceae
NCBI taxonomy Id: 579138
Other names: Z. mobilis subsp. pomaceae ATCC 29192, Zymomonas mobilis subsp. pomaceae ATCC 29192, Zymomonas mobilis subsp. pomaceae str. ATCC 29192, Zymomonas mobilis subsp. pomaceae strain ATCC 29192
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