Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACS84620.1PFAM: Extracellular ligand-binding receptor; KEGG: bpy:Bphyt_5759 putative UreA/short-chain amide transport system substrate-binding protein precursor. (414 aa)    
Predicted Functional Partners:
ACS84618.1
PFAM: inner-membrane translocator; KEGG: bpy:Bphyt_5757 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.990
ACS84619.1
PFAM: inner-membrane translocator; KEGG: bpy:Bphyt_5758 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.989
ACS84617.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bpy:Bphyt_5756 ABC transporter related.
 
 
 0.986
ACS84616.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bpy:Bphyt_5755 ABC transporter related.
 
 
 0.983
ACS84613.1
PFAM: ANTAR domain protein; KEGG: bpy:Bphyt_5752 response regulator receiver and ANTAR domain protein.
 
 
 0.957
ACS84615.1
PFAM: Acetamidase/Formamidase; KEGG: bpy:Bphyt_5754 acetamidase/formamidase.
 
     0.827
ACS85624.1
PFAM: inner-membrane translocator; KEGG: vei:Veis_4470 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.755
ACS85623.1
PFAM: inner-membrane translocator; KEGG: bcm:Bcenmc03_6243 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.737
ACS84423.1
PFAM: inner-membrane translocator; KEGG: kpe:KPK_4386 branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.711
ACS84422.1
PFAM: inner-membrane translocator; KEGG: kpe:KPK_4385 branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.690
Your Current Organism:
Dickeya paradisiaca
NCBI taxonomy Id: 579405
Other names: D. paradisiaca Ech703, Dickeya dadantii Ech703, Dickeya paradisiaca Ech703
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