Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACS84069.1 | ACS84732.1 | Dd703_0252 | Dd703_0925 | PFAM: protein of unknown function DUF323; KEGG: plu:plu0187 CpmF protein involved in carbapenem resistance. | PFAM: glutamine amidotransferase class-II; KEGG: eca:ECA3472 hypothetical protein. | 0.419 |
ACS84730.1 | ACS84732.1 | Dd703_0923 | Dd703_0925 | PFAM: Protein of unknown function DUF1974; acyl-CoA dehydrogenase domain protein; KEGG: eca:ECA3474 acyl-CoA dehydrogenase. | PFAM: glutamine amidotransferase class-II; KEGG: eca:ECA3472 hypothetical protein. | 0.412 |
ACS84730.1 | gmhA | Dd703_0923 | Dd703_0924 | PFAM: Protein of unknown function DUF1974; acyl-CoA dehydrogenase domain protein; KEGG: eca:ECA3474 acyl-CoA dehydrogenase. | Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate. | 0.481 |
ACS84732.1 | ACS84069.1 | Dd703_0925 | Dd703_0252 | PFAM: glutamine amidotransferase class-II; KEGG: eca:ECA3472 hypothetical protein. | PFAM: protein of unknown function DUF323; KEGG: plu:plu0187 CpmF protein involved in carbapenem resistance. | 0.419 |
ACS84732.1 | ACS84730.1 | Dd703_0925 | Dd703_0923 | PFAM: glutamine amidotransferase class-II; KEGG: eca:ECA3472 hypothetical protein. | PFAM: Protein of unknown function DUF1974; acyl-CoA dehydrogenase domain protein; KEGG: eca:ECA3474 acyl-CoA dehydrogenase. | 0.412 |
ACS84732.1 | gmhA | Dd703_0925 | Dd703_0924 | PFAM: glutamine amidotransferase class-II; KEGG: eca:ECA3472 hypothetical protein. | Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate. | 0.707 |
gmhA | ACS84730.1 | Dd703_0924 | Dd703_0923 | Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate. | PFAM: Protein of unknown function DUF1974; acyl-CoA dehydrogenase domain protein; KEGG: eca:ECA3474 acyl-CoA dehydrogenase. | 0.481 |
gmhA | ACS84732.1 | Dd703_0924 | Dd703_0925 | Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate. | PFAM: glutamine amidotransferase class-II; KEGG: eca:ECA3472 hypothetical protein. | 0.707 |