STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
bepAPeptidase M48 Ste24p; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. (488 aa)    
Predicted Functional Partners:
ACS84873.1
TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: spe:Spro_3518 arsenate reductase.
  
  
 0.808
ACS85862.1
KEGG: eca:ECA2459 carboxy-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; Belongs to the peptidase S41A family.
 
 
 0.686
ACS83995.1
PFAM: Peptidase M23; KEGG: eca:ECA0170 hypothetical protein.
 
 
   0.672
ACS84284.1
PFAM: MscS Mechanosensitive ion channel; KEGG: eca:ECA3967 hypothetical protein.
 
 
   0.670
lptD
Organic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.
  
  
 0.593
ACS84875.1
Peroxiredoxin; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; electron transport protein SCO1/SenC; Redoxin domain protein; KEGG: eca:ECA1260 thioredoxin-dependent thiol peroxidase.
  
    0.593
ACS86520.1
PFAM: SseB family protein; KEGG: eca:ECA3229 enhanced serine sensitivity protein SseB.
 
 
 
 0.592
ACS84876.1
PFAM: amino acid-binding ACT domain protein; KEGG: eca:ECA1261 glycine cleavage system transcriptional repressor.
 
    0.563
ACS87646.1
PFAM: cellulose synthase operon C domain protein; Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein; KEGG: eta:ETA_33900 cellulose synthase operon protein C.
   
 
 0.527
ACS84050.1
PFAM: protein of unknown function DUF484; KEGG: eca:ECA4182 hypothetical protein.
  
    0.517
Your Current Organism:
Dickeya paradisiaca
NCBI taxonomy Id: 579405
Other names: D. paradisiaca Ech703, Dickeya dadantii Ech703, Dickeya paradisiaca Ech703
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