STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS85163.1Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_1117 LysR family transcriptional regulator. (309 aa)    
Predicted Functional Partners:
ACS85215.1
PFAM: regulatory protein LysR; KEGG: avi:Avi_0554 transcriptional regulator LysR family.
  
     0.773
ACS86999.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mmw:Mmwyl1_3825 LysR family transcriptional regulator.
  
     0.769
ACS85248.1
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; KEGG: eca:ECA2888 nitrogen assimilation regulatory protein (partial); Belongs to the LysR transcriptional regulatory family.
  
     0.767
ACS85240.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA4427 LysR family transcriptional regulator.
  
     0.764
ACS86703.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA2075 LysR family transcriptional regulator.
  
     0.760
ACS86870.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA1085 LysR family transcriptional regulator.
  
     0.759
ACS87260.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA2075 LysR family transcriptional regulator.
  
     0.759
ACS86033.1
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: eca:ECA2642 LysR family transcriptional regulator.
  
     0.758
ACS86108.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA2724 putative DNA-binding transcriptional regulator.
  
     0.757
ACS86268.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ent:Ent638_1967 LysR family transcriptional regulator.
  
     0.746
Your Current Organism:
Dickeya paradisiaca
NCBI taxonomy Id: 579405
Other names: D. paradisiaca Ech703, Dickeya dadantii Ech703, Dickeya paradisiaca Ech703
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