STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS85281.1PFAM: periplasmic binding protein; KEGG: eca:ECA3096 ABC-transporter periplasmic-binding component. (354 aa)    
Predicted Functional Partners:
ACS85282.1
PFAM: transport system permease protein; KEGG: eca:ECA3095 ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.970
ACS85283.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA3094 ABC transporter ATP-binding protein.
 
 
 0.961
ACS85284.1
KEGG: eca:ECA3093 hypothetical protein.
 
   
 0.906
ACS86533.1
PFAM: transport system permease protein; KEGG: eca:ECA3242 ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.866
btuC
Transport system permease protein; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Involved in the translocation of the substrate across the membrane.
 
 
 
 0.836
ACS85015.1
PFAM: transport system permease protein; KEGG: sgl:SG1539 hemin ABC transporter permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.825
ACS86534.1
PFAM: ABC transporter related; SMC domain protein; SMART: AAA ATPase; KEGG: eca:ECA3243 putative ferric-enterobactin ABC transporter ATP-binding protein.
 
 
 0.769
ACS86589.1
PFAM: transport system permease protein; KEGG: eca:ECA3310 iron-hydroxamate transporter permease subunit; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.740
ACS85297.1
PFAM: transport system permease protein; KEGG: yen:YE3619 iron-enterobactin transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.737
hmuV
ABC transporter related; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
 
 0.710
Your Current Organism:
Dickeya paradisiaca
NCBI taxonomy Id: 579405
Other names: D. paradisiaca Ech703, Dickeya dadantii Ech703, Dickeya paradisiaca Ech703
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