STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS85460.1PFAM: LPP repeat-containing protein; KEGG: eca:ECA1866 major outer membrane lipoprotein. (78 aa)    
Predicted Functional Partners:
lolA
Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
  
 
 
 0.851
ACS84813.1
PFAM: Haemolysin expression modulating family protein; KEGG: eca:ECA1165 hemolysin expression-modulating protein.
  
    0.768
ACS85731.1
PFAM: protein of unknown function UPF0259; KEGG: eca:ECA2305 hypothetical protein.
  
     0.766
ACS85913.1
PFAM: DNA polymerase II beta subunit; KEGG: spe:Spro_1941 DNA polymerase III subunit theta.
  
     0.762
ACS85747.1
PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS; KEGG: eca:ECA2328 global DNA-binding transcriptional dual regulator H-NS; Belongs to the histone-like protein H-NS family.
  
    0.761
ACS86655.1
PFAM: Uncharacterized lipoprotein; KEGG: spe:Spro_1092 hypothetical protein.
  
     0.754
ACS85734.1
TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
    
   0.749
ACS84028.1
PFAM: WzyE family protein; KEGG: esa:ESA_03766 putative enterobacterial common antigen polymerase.
  
     0.745
wecF
4-alpha-L-fucosyltransferase; Catalyzes the synthesis of Und-PP-GlcNAc-ManNAcA-Fuc4NAc (Lipid III), the third lipid-linked intermediate involved in ECA synthesis; Belongs to the glycosyltransferase 56 family.
  
     0.733
ACS86475.1
PFAM: OmpA domain protein transmembrane region-containing protein; OmpA/MotB domain protein; KEGG: eca:ECA1751 outer membrane protein A; Belongs to the outer membrane OOP (TC 1.B.6) superfamily.
 
 
 0.733
Your Current Organism:
Dickeya paradisiaca
NCBI taxonomy Id: 579405
Other names: D. paradisiaca Ech703, Dickeya dadantii Ech703, Dickeya paradisiaca Ech703
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