STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS85801.1TIGRFAM: outer membrane lipoprotein, Slp family; PFAM: outer membrane lipoprotein Slp; KEGG: eca:ECA2373 outer membrane lipoprotein. (205 aa)    
Predicted Functional Partners:
smg
PFAM: protein of unknown function DUF494; KEGG: eca:ECA3997 hypothetical protein; Belongs to the Smg family.
  
     0.644
ACS85802.1
PFAM: peptidase M22 glycoprotease; KEGG: eca:ECA2374 hypothetical protein.
  
  
 0.626
aaeX
PFAM: protein of unknown function DUF1656; KEGG: eca:ECA0277 hypothetical protein.
  
     0.589
mzrA
Conserved hypothetical protein; Modulates the activity of the EnvZ/OmpR two-component regulatory system, probably by directly modulating EnvZ enzymatic activity and increasing stability of phosphorylated OmpR.
  
     0.583
ACS85690.1
TIGRFAM: DNA replication terminus site-binding protein; PFAM: site-binding protein DNA replication region; KEGG: eca:ECA2261 DNA replication terminus site-binding protein.
  
     0.574
ACS84814.1
KEGG: eca:ECA1166 hypothetical protein.
  
     0.528
ACS85374.1
KEGG: eca:ECA1784 biofilm formation regulatory protein BssS.
  
     0.488
ACS86171.1
PFAM: virulence-related outer membrane protein; KEGG: eca:ECA2764 outer membrane protein X.
  
     0.488
ACS84275.1
KEGG: spe:Spro_0410 hypothetical protein.
  
     0.478
ACS85910.1
KEGG: eca:ECA2472 hypothetical protein.
  
     0.478
Your Current Organism:
Dickeya paradisiaca
NCBI taxonomy Id: 579405
Other names: D. paradisiaca Ech703, Dickeya dadantii Ech703, Dickeya paradisiaca Ech703
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.