STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS85903.1PFAM: protein of unknown function DUF1501; KEGG: avi:Avi_3565 hypothetical protein. (405 aa)    
Predicted Functional Partners:
ACS85902.1
PFAM: Protein of unknown function DUF1800; KEGG: eca:ECA2048 hypothetical protein.
 
     0.939
ACS87202.1
PFAM: Protein of unknown function DUF1800; KEGG: bph:Bphy_4087 hypothetical protein.
 
     0.783
ACS85904.1
PFAM: chitin synthase; KEGG: eca:ECA2046 putative bifunctional enzyme including aminotransferase and chitin synthase.
       0.682
ACS85901.1
PFAM: OsmC family protein; KEGG: bcj:BCAM2803 putative stress-induced protein.
       0.453
ACS87224.1
PFAM: protein of unknown function DUF1328; KEGG: sgl:SG0393 hypothetical protein.
   
    0.438
Your Current Organism:
Dickeya paradisiaca
NCBI taxonomy Id: 579405
Other names: D. paradisiaca Ech703, Dickeya dadantii Ech703, Dickeya paradisiaca Ech703
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.