STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
ACS86007.1Citrate lyase ligase; Acetylation of prosthetic group (2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A) of the gamma subunit of citrate lyase. (347 aa)    
Predicted Functional Partners:
ACS86005.1
KEGG: eca:ECA2572 citrate lyase beta chain; TIGRFAM: citrate lyase, beta subunit; PFAM: HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.988
ACS86004.1
KEGG: eca:ECA2571 citrate lyase alpha chain; TIGRFAM: citrate lyase, alpha subunit; PFAM: Citrate lyase alpha subunit.
 
  
 0.986
citD
Citrate lyase acyl carrier protein; Covalent carrier of the coenzyme of citrate lyase.
 
  
 0.980
ACS86003.1
holo-ACP synthase CitX; KEGG: eca:ECA2570 apo-citrate lyase phosphoribosyl-dephospho-CoA transferase; TIGRFAM: holo-ACP synthase CitX; PFAM: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase.
 
 
 0.976
citG
triphosphoribosyl-dephospho-CoA synthase CitG; KEGG: eca:ECA2569 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase; TIGRFAM: triphosphoribosyl-dephospho-CoA synthase CitG; PFAM: triphosphoribosyl-dephospho-CoA protein.
  
 0.968
mdcB
triphosphoribosyl-dephospho-CoA synthase MdcB; Involved in the formation of 2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A, the prosthetic group of the acyl-carrier protein of the malonate decarboxylase; Belongs to the CitG/MdcB family.
  
 0.932
mdcC
Malonate decarboxylase acyl carrier protein; Subunit of malonate decarboxylase, it is an acyl carrier protein to which acetyl and malonyl thioester residues are bound via a 2'-(5''-phosphoribosyl)-3'-dephospho-CoA prosthetic group and turn over during the catalytic mechanism.
  
  
 0.729
ACS86009.1
PFAM: Citrate carrier protein; KEGG: eca:ECA2576 citrate/acetate antiporter.
 
   
 0.703
ACS86008.1
5-carboxymethyl-2-hydroxymuconate Delta-isomerase; PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: eca:ECA2575 putative fumarylacetoacetate hydrolase.
       0.596
ACS87661.1
PFAM: Citrate carrier protein; KEGG: eca:ECA4395 Na(+)-malate symporter.
 
   
 0.438
Your Current Organism:
Dickeya paradisiaca
NCBI taxonomy Id: 579405
Other names: D. paradisiaca Ech703, Dickeya dadantii Ech703, Dickeya paradisiaca Ech703
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