STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS86404.1KEGG: ent:Ent638_0752 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (354 aa)    
Predicted Functional Partners:
ACS86401.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ent:Ent638_0755 binding-protein-dependent transport systems inner membrane component.
    0.879
ACS85742.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yen:YE2231 oligopeptide transport system permease protein.
  
 0.865
ACS86402.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ent:Ent638_0754 binding-protein-dependent transport systems inner membrane component.
   0.840
ACS85743.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA2323 oligopeptide transporter permease.
 
 0.834
ACS86405.1
KEGG: ent:Ent638_0751 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
   
0.832
ACS86406.1
PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: ent:Ent638_0750 GntR family transcriptional regulator.
       0.773
ACS86403.1
PFAM: extracellular solute-binding protein family 5; KEGG: ent:Ent638_0753 extracellular solute-binding protein.
  
    0.752
ACS85595.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_3775 oligopeptide ABC transporter permease protein.
 
    0.722
ACS84078.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH0030 oligopeptide ABC transporter (permease).
 
    0.700
ACS85605.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA1006 ABC transporter, permease protein.
 
    0.690
Your Current Organism:
Dickeya paradisiaca
NCBI taxonomy Id: 579405
Other names: D. paradisiaca Ech703, Dickeya dadantii Ech703, Dickeya paradisiaca Ech703
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