STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS86826.1PFAM: Carbamoyltransferase; KEGG: mlo:mlr6171 nodulation protein NolO. (690 aa)    
Predicted Functional Partners:
ACS86827.1
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; phosphopantetheine-binding; condensation domain protein; KEGG: spe:Spro_3427 enterobactin synthase subunit F.
 
     0.772
ACS85228.1
KEGG: bsu:BSU17180 polyketide synthase of type I.
     
 0.576
ACS86828.1
KEGG: spe:Spro_3428 MbtH domain-containing protein.
       0.497
ACS85475.1
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; phosphopantetheine-binding; condensation domain protein; KEGG: mxa:MXAN_3636 non-ribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
 
     0.468
ACS86834.1
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; condensation domain protein; KEGG: bbt:BBta_6812 arthrofactin synthetase/syringopeptin synthetase C-related non-ribosomal peptide synthetase module; Belongs to the ATP-dependent AMP-binding enzyme family.
 
     0.467
ACS83990.1
TIGRFAM: lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase family 9; KEGG: eca:ECA0164 ADP-heptose:LPS heptosyltransferase II.
 
  
 0.459
ACS86843.1
PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; KEGG: scl:sce8262 non-ribosomal peptide synthetase.
 
     0.459
ACS85473.1
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: psb:Psyr_3722 amino acid adenylation.
 
     0.435
ACS86842.1
TIGRFAM: amino acid adenylation domain protein; methyltransferase FkbM family; PFAM: AMP-dependent synthetase and ligase; Methyltransferase type 11; Methyltransferase type 12; phosphopantetheine-binding; condensation domain protein; KEGG: nmu:Nmul_A1829 amino acid adenylation.
 
     0.415
ACS86837.1
MCP methyltransferase, CheR-type; TIGRFAM: amino acid adenylation domain protein; non-ribosomal peptide synthase; PFAM: AMP-dependent synthetase and ligase; Methyltransferase type 11; MCP methyltransferase CheR-type; Luciferase-like monooxygenase; Methyltransferase type 12; phosphopantetheine-binding; condensation domain protein; KEGG: mxa:MXAN_3779 non-ribosomal peptide synthetase/polyketide synthase.
 
     0.409
Your Current Organism:
Dickeya paradisiaca
NCBI taxonomy Id: 579405
Other names: D. paradisiaca Ech703, Dickeya dadantii Ech703, Dickeya paradisiaca Ech703
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