STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACS86967.1PFAM: GCN5-related N-acetyltransferase; KEGG: yen:YE0513 putative acetyltransferase. (142 aa)    
Predicted Functional Partners:
ACS86966.1
Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: eca:ECA0933 LuxR family transcriptional regulator.
       0.693
ACS86965.1
PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: eca:ECA0932 permease.
       0.662
ACS86777.1
PFAM: GCN5-related N-acetyltransferase; KEGG: spc:Sputcn32_1266 GCN5-related N-acetyltransferase.
 
    0.510
ACS85228.1
KEGG: bsu:BSU17180 polyketide synthase of type I.
     
 0.416
ACS86964.1
TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: eca:ECA0882 hypothetical protein.
       0.409
Your Current Organism:
Dickeya paradisiaca
NCBI taxonomy Id: 579405
Other names: D. paradisiaca Ech703, Dickeya dadantii Ech703, Dickeya paradisiaca Ech703
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.