STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS86969.1PFAM: protein of unknown function DUF1131; KEGG: ypg:YpAngola_A2779 hypothetical protein. (194 aa)    
Predicted Functional Partners:
ACS86797.1
KEGG: eca:ECA0979 hypothetical protein.
  
    0.801
ACS85819.1
KEGG: eca:ECA2397 hypothetical protein.
  
   
 0.775
ACS87668.1
PFAM: protein of unknown function DUF1375; KEGG: eca:ECA4404 hypothetical protein.
  
     0.772
ACS87632.1
PFAM: protein of unknown function DUF1145; KEGG: eca:ECA4348 hypothetical protein.
  
     0.768
ACS85971.1
PFAM: cytoplasmic chaperone TorD family protein; KEGG: eca:ECA2528 hypothetical protein.
  
     0.767
ACS86612.1
KEGG: eca:ECA3332 hypothetical protein.
  
     0.767
ACS87602.1
KEGG: eca:ECA4310 putative stress resistance protein.
  
     0.765
ACS85806.1
PFAM: protein of unknown function UPF0181; KEGG: eum:ECUMN_2103 hypothetical protein; Belongs to the UPF0181 family.
  
     0.761
ACS85970.1
PFAM: protein of unknown function DUF1439; KEGG: eca:ECA2527 hypothetical protein.
  
     0.758
ACS87538.1
PFAM: protein of unknown function DUF1422; KEGG: eca:ECA4240 hypothetical protein.
  
     0.749
Your Current Organism:
Dickeya paradisiaca
NCBI taxonomy Id: 579405
Other names: D. paradisiaca Ech703, Dickeya dadantii Ech703, Dickeya paradisiaca Ech703
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.