Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KJZ03624.1 | KJZ17467.1 | TW86_22675 | TW86_03530 | TraB family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Surfeit locus 1; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.769 |
| KJZ03624.1 | KJZ17811.1 | TW86_22675 | TW86_02280 | TraB family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. | 0.769 |
| KJZ03624.1 | secY | TW86_22675 | TW86_00140 | TraB family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.769 |
| KJZ07676.1 | KJZ17811.1 | TW86_17195 | TW86_02280 | PA-phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. | 0.774 |
| KJZ07676.1 | KJZ17854.1 | TW86_17195 | TW86_02275 | PA-phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.408 |
| KJZ14933.1 | KJZ17811.1 | TW86_09370 | TW86_02280 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. | 0.696 |
| KJZ15495.1 | KJZ17811.1 | TW86_08745 | TW86_02280 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. | 0.696 |
| KJZ16887.1 | KJZ17811.1 | TW86_06275 | TW86_02280 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. | 0.696 |
| KJZ17321.1 | KJZ17811.1 | TW86_03385 | TW86_02280 | PA-phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. | 0.750 |
| KJZ17321.1 | KJZ17854.1 | TW86_03385 | TW86_02275 | PA-phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.406 |
| KJZ17467.1 | KJZ03624.1 | TW86_03530 | TW86_22675 | Surfeit locus 1; Derived by automated computational analysis using gene prediction method: Protein Homology. | TraB family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.769 |
| KJZ17467.1 | KJZ17811.1 | TW86_03530 | TW86_02280 | Surfeit locus 1; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. | 0.769 |
| KJZ17467.1 | secY | TW86_03530 | TW86_00140 | Surfeit locus 1; Derived by automated computational analysis using gene prediction method: Protein Homology. | Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.796 |
| KJZ17811.1 | KJZ03624.1 | TW86_02280 | TW86_22675 | Nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. | TraB family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.769 |
| KJZ17811.1 | KJZ07676.1 | TW86_02280 | TW86_17195 | Nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. | PA-phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.774 |
| KJZ17811.1 | KJZ14933.1 | TW86_02280 | TW86_09370 | Nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.696 |
| KJZ17811.1 | KJZ15495.1 | TW86_02280 | TW86_08745 | Nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.696 |
| KJZ17811.1 | KJZ16887.1 | TW86_02280 | TW86_06275 | Nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.696 |
| KJZ17811.1 | KJZ17321.1 | TW86_02280 | TW86_03385 | Nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. | PA-phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.750 |
| KJZ17811.1 | KJZ17467.1 | TW86_02280 | TW86_03530 | Nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. | Surfeit locus 1; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.769 |
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