STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJZ10590.1Protein nirF; Derived by automated computational analysis using gene prediction method: Protein Homology. (408 aa)    
Predicted Functional Partners:
KJZ10589.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.997
KJZ10586.1
Protein nirG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.968
KJZ10585.1
Protein nirH; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.954
KJZ10584.1
Cytochrome Cbb3; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.952
KJZ10550.1
Nitric oxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.
 
 0.937
KJZ10588.1
Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.923
KJZ07274.1
Cytochrome C peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.916
KJZ10587.1
Protein nirL; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.908
KJZ10547.1
AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.908
KJZ10551.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.907
Your Current Organism:
Halomonas sp. S2151
NCBI taxonomy Id: 579478
Other names: H. sp. S2151
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.