Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KJZ19552.1 | tatA | TW80_01140 | TW80_03160 | Peptidase C54; Derived by automated computational analysis using gene prediction method: Protein Homology. | Prohead protease; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.823 |
| KJZ19888.1 | tatA | TW80_03155 | TW80_03160 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Prohead protease; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.529 |
| KJZ20563.1 | guaA | TW80_07230 | TW80_04555 | Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.895 |
| KJZ20563.1 | tatA | TW80_07230 | TW80_03160 | Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Prohead protease; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.588 |
| KJZ20813.1 | KJZ20815.1 | TW80_08695 | TW80_08705 | Protease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Universal stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.450 |
| KJZ20813.1 | tatA | TW80_08695 | TW80_03160 | Protease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Prohead protease; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.855 |
| KJZ20815.1 | KJZ20813.1 | TW80_08705 | TW80_08695 | Universal stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Protease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.450 |
| KJZ20815.1 | tatA | TW80_08705 | TW80_03160 | Universal stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Prohead protease; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.551 |
| KJZ21160.1 | tatA | TW80_00435 | TW80_03160 | Flagellar basal body protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | Prohead protease; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.522 |
| atpE | tatA | TW80_08280 | TW80_03160 | ATP synthase subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | Prohead protease; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.585 |
| guaA | KJZ20563.1 | TW80_04555 | TW80_07230 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.895 |
| guaA | tatA | TW80_04555 | TW80_03160 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Prohead protease; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.984 |
| guaA | tatC | TW80_04555 | TW80_03170 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Preprotein translocase subunit TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.406 |
| hisE | tatA | TW80_02630 | TW80_03160 | phosphoribosyl-ATP pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Prohead protease; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.644 |
| tatA | KJZ19552.1 | TW80_03160 | TW80_01140 | Prohead protease; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | Peptidase C54; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.823 |
| tatA | KJZ19888.1 | TW80_03160 | TW80_03155 | Prohead protease; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.529 |
| tatA | KJZ20563.1 | TW80_03160 | TW80_07230 | Prohead protease; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.588 |
| tatA | KJZ20813.1 | TW80_03160 | TW80_08695 | Prohead protease; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | Protease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.855 |
| tatA | KJZ20815.1 | TW80_03160 | TW80_08705 | Prohead protease; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | Universal stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.551 |
| tatA | KJZ21160.1 | TW80_03160 | TW80_00435 | Prohead protease; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | Flagellar basal body protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | 0.522 |
page 1 of 2
