STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJZ20982.1Multidrug DMT transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (287 aa)    
Predicted Functional Partners:
KJZ19990.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.688
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
    0.653
KJZ20113.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.648
KJZ20112.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.473
KJZ20115.1
Trimethylamine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the trimethylamine methyltransferase family.
       0.419
Your Current Organism:
Loktanella sp. S4079
NCBI taxonomy Id: 579483
Other names: L. sp. S4079
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