Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KJZ18968.1 | KJZ19354.1 | TW80_12925 | TW80_11335 | Cell envelope biogenesis protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Organic solvent tolerance protein OstA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.471 |
| KJZ18968.1 | KJZ20255.1 | TW80_12925 | TW80_05380 | Cell envelope biogenesis protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.448 |
| KJZ18968.1 | KJZ20997.1 | TW80_12925 | TW80_05375 | Cell envelope biogenesis protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.504 |
| KJZ18968.1 | bamA | TW80_12925 | TW80_04510 | Cell envelope biogenesis protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Outer membrane protein assembly complex, YaeT protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.592 |
| KJZ18968.1 | lptD | TW80_12925 | TW80_05385 | Cell envelope biogenesis protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.818 |
| KJZ19354.1 | KJZ18968.1 | TW80_11335 | TW80_12925 | Organic solvent tolerance protein OstA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cell envelope biogenesis protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.471 |
| KJZ19354.1 | KJZ20255.1 | TW80_11335 | TW80_05380 | Organic solvent tolerance protein OstA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.536 |
| KJZ19354.1 | KJZ20997.1 | TW80_11335 | TW80_05375 | Organic solvent tolerance protein OstA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.556 |
| KJZ19354.1 | bamA | TW80_11335 | TW80_04510 | Organic solvent tolerance protein OstA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Outer membrane protein assembly complex, YaeT protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.552 |
| KJZ19354.1 | lptD | TW80_11335 | TW80_05385 | Organic solvent tolerance protein OstA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.946 |
| KJZ20253.1 | KJZ20255.1 | TW80_05365 | TW80_05380 | DNA polymerase III subunit chi; Derived by automated computational analysis using gene prediction method: Protein Homology. | Permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.755 |
| KJZ20253.1 | KJZ20257.1 | TW80_05365 | TW80_05390 | DNA polymerase III subunit chi; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.763 |
| KJZ20253.1 | KJZ20997.1 | TW80_05365 | TW80_05375 | DNA polymerase III subunit chi; Derived by automated computational analysis using gene prediction method: Protein Homology. | Permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.756 |
| KJZ20253.1 | lptD | TW80_05365 | TW80_05385 | DNA polymerase III subunit chi; Derived by automated computational analysis using gene prediction method: Protein Homology. | Organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.793 |
| KJZ20253.1 | pdxA | TW80_05365 | TW80_05395 | DNA polymerase III subunit chi; Derived by automated computational analysis using gene prediction method: Protein Homology. | 4-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP). | 0.689 |
| KJZ20253.1 | pepA | TW80_05365 | TW80_05370 | DNA polymerase III subunit chi; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aminopeptidase A; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.892 |
| KJZ20253.1 | rsmA | TW80_05365 | TW80_05400 | DNA polymerase III subunit chi; Derived by automated computational analysis using gene prediction method: Protein Homology. | 16S rRNA methyltransferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.718 |
| KJZ20255.1 | KJZ18968.1 | TW80_05380 | TW80_12925 | Permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cell envelope biogenesis protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.448 |
| KJZ20255.1 | KJZ19354.1 | TW80_05380 | TW80_11335 | Permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Organic solvent tolerance protein OstA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.536 |
| KJZ20255.1 | KJZ20253.1 | TW80_05380 | TW80_05365 | Permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit chi; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.755 |
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