STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJZ20609.1MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (122 aa)    
Predicted Functional Partners:
KJZ17931.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.822
KJZ20607.1
Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.719
KJZ20608.1
Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.719
KJZ20606.1
Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.712
KJZ20610.1
MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.687
KJZ20229.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.660
KJZ19737.1
methylmalonyl-CoA mutase; MDM; functions in conversion of succinate to propionate; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.591
KJZ20829.1
Protein meaA; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.591
KJZ20621.1
Malate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.570
KJZ19403.1
Malic enzyme; NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.570
Your Current Organism:
Loktanella sp. S4079
NCBI taxonomy Id: 579483
Other names: L. sp. S4079
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.