STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJZ17953.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (343 aa)    
Predicted Functional Partners:
KJZ17941.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.839
KJZ17942.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.831
KJZ17943.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.725
KJZ18547.1
Inosose dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.633
KJZ18544.1
Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.625
KJZ18549.1
5-deoxyglucuronate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.604
KJZ17944.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.574
KJZ17945.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.569
KJZ18546.1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family.
  
  
 0.560
KJZ18998.1
Gluconokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
  0.552
Your Current Organism:
Loktanella sp. S4079
NCBI taxonomy Id: 579483
Other names: L. sp. S4079
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.