Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_001266615_00056 | GCA_001266615_02128 | GCA_001266615_00056 | GCA_001266615_02128 | Unannotated protein. | Unannotated protein. | 0.531 |
GCA_001266615_00056 | GCA_001266615_03797 | GCA_001266615_00056 | GCA_001266615_03797 | Unannotated protein. | Unannotated protein. | 0.511 |
GCA_001266615_00056 | GCA_001266615_03872 | GCA_001266615_00056 | GCA_001266615_03872 | Unannotated protein. | Unannotated protein. | 0.714 |
GCA_001266615_00056 | GCA_001266615_04301 | GCA_001266615_00056 | GCA_001266615_04301 | Unannotated protein. | Unannotated protein. | 0.472 |
GCA_001266615_00056 | ligT | GCA_001266615_00056 | GCA_001266615_00577 | Unannotated protein. | Unannotated protein; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | 0.507 |
GCA_001266615_00056 | mtfA | GCA_001266615_00056 | GCA_001266615_01138 | Unannotated protein. | Unannotated protein; Involved in the regulation of ptsG expression by binding and inactivating Mlc. | 0.470 |
GCA_001266615_00056 | ndh | GCA_001266615_00056 | GCA_001266615_00057 | Unannotated protein. | Unannotated protein. | 0.534 |
GCA_001266615_00056 | rseA | GCA_001266615_00056 | GCA_001266615_03766 | Unannotated protein. | Unannotated protein; An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degradi [...] | 0.819 |
GCA_001266615_00056 | rstB | GCA_001266615_00056 | GCA_001266615_00984 | Unannotated protein. | Unannotated protein. | 0.510 |
GCA_001266615_00056 | yeeA | GCA_001266615_00056 | GCA_001266615_03082 | Unannotated protein. | Unannotated protein. | 0.581 |
GCA_001266615_02128 | GCA_001266615_00056 | GCA_001266615_02128 | GCA_001266615_00056 | Unannotated protein. | Unannotated protein. | 0.531 |
GCA_001266615_02128 | GCA_001266615_03797 | GCA_001266615_02128 | GCA_001266615_03797 | Unannotated protein. | Unannotated protein. | 0.425 |
GCA_001266615_02128 | GCA_001266615_03872 | GCA_001266615_02128 | GCA_001266615_03872 | Unannotated protein. | Unannotated protein. | 0.721 |
GCA_001266615_02128 | GCA_001266615_04301 | GCA_001266615_02128 | GCA_001266615_04301 | Unannotated protein. | Unannotated protein. | 0.583 |
GCA_001266615_02128 | rstB | GCA_001266615_02128 | GCA_001266615_00984 | Unannotated protein. | Unannotated protein. | 0.567 |
GCA_001266615_02128 | yeeA | GCA_001266615_02128 | GCA_001266615_03082 | Unannotated protein. | Unannotated protein. | 0.742 |
GCA_001266615_03797 | GCA_001266615_00056 | GCA_001266615_03797 | GCA_001266615_00056 | Unannotated protein. | Unannotated protein. | 0.511 |
GCA_001266615_03797 | GCA_001266615_02128 | GCA_001266615_03797 | GCA_001266615_02128 | Unannotated protein. | Unannotated protein. | 0.425 |
GCA_001266615_03797 | GCA_001266615_03872 | GCA_001266615_03797 | GCA_001266615_03872 | Unannotated protein. | Unannotated protein. | 0.654 |
GCA_001266615_03797 | ligT | GCA_001266615_03797 | GCA_001266615_00577 | Unannotated protein. | Unannotated protein; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | 0.624 |
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