Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_001266615_00841 | GCA_001266615_03062 | GCA_001266615_00841 | GCA_001266615_03062 | Unannotated protein. | Unannotated protein. | 0.869 |
GCA_001266615_00841 | GCA_001266615_04350 | GCA_001266615_00841 | GCA_001266615_04350 | Unannotated protein. | Unannotated protein. | 0.927 |
GCA_001266615_00841 | benC | GCA_001266615_00841 | GCA_001266615_04432 | Unannotated protein. | Unannotated protein; Belongs to the cytochrome P450 family. | 0.908 |
GCA_001266615_00841 | carA | GCA_001266615_00841 | GCA_001266615_00689 | Unannotated protein. | Unannotated protein; Belongs to the CarA family. | 0.931 |
GCA_001266615_00841 | carB | GCA_001266615_00841 | GCA_001266615_00688 | Unannotated protein. | Unannotated protein; Belongs to the CarB family. | 0.869 |
GCA_001266615_00841 | fre | GCA_001266615_00841 | GCA_001266615_01570 | Unannotated protein. | Unannotated protein. | 0.429 |
GCA_001266615_00841 | pyrB | GCA_001266615_00841 | GCA_001266615_04155 | Unannotated protein. | Unannotated protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.911 |
GCA_001266615_00841 | pyrD | GCA_001266615_00841 | GCA_001266615_01671 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.984 |
GCA_001266615_00841 | pyrE | GCA_001266615_00841 | GCA_001266615_00308 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.944 |
GCA_001266615_00841 | pyrF | GCA_001266615_00841 | GCA_001266615_00139 | Unannotated protein. | Unannotated protein; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.935 |
GCA_001266615_03062 | GCA_001266615_00841 | GCA_001266615_03062 | GCA_001266615_00841 | Unannotated protein. | Unannotated protein. | 0.869 |
GCA_001266615_03062 | GCA_001266615_04350 | GCA_001266615_03062 | GCA_001266615_04350 | Unannotated protein. | Unannotated protein. | 0.911 |
GCA_001266615_03062 | benC | GCA_001266615_03062 | GCA_001266615_04432 | Unannotated protein. | Unannotated protein; Belongs to the cytochrome P450 family. | 0.881 |
GCA_001266615_03062 | carA | GCA_001266615_03062 | GCA_001266615_00689 | Unannotated protein. | Unannotated protein; Belongs to the CarA family. | 0.992 |
GCA_001266615_03062 | fre | GCA_001266615_03062 | GCA_001266615_01570 | Unannotated protein. | Unannotated protein. | 0.849 |
GCA_001266615_03062 | pyrB | GCA_001266615_03062 | GCA_001266615_04155 | Unannotated protein. | Unannotated protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.959 |
GCA_001266615_03062 | pyrD | GCA_001266615_03062 | GCA_001266615_01671 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.952 |
GCA_001266615_03062 | pyrE | GCA_001266615_03062 | GCA_001266615_00308 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.915 |
GCA_001266615_03062 | pyrF | GCA_001266615_03062 | GCA_001266615_00139 | Unannotated protein. | Unannotated protein; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.902 |
GCA_001266615_04350 | GCA_001266615_00841 | GCA_001266615_04350 | GCA_001266615_00841 | Unannotated protein. | Unannotated protein. | 0.927 |
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