STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
livF_2Unannotated protein; Belongs to the ABC transporter superfamily. (237 aa)    
Predicted Functional Partners:
GCA_001266615_00457
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.998
livH_3
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.993
lptB_3
Unannotated protein.
 
 
0.989
livH_1
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.988
livK
Unannotated protein.
 
 
 0.971
livJ_1
Unannotated protein.
 
 
 0.944
livH_2
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.942
livJ_2
Unannotated protein.
 
 
 0.929
lptB_2
Unannotated protein.
 
 
0.900
GCA_001266615_04115
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.897
Your Current Organism:
Kluyvera cryocrescens
NCBI taxonomy Id: 580
Other names: ATCC 33435, CCUG 18767, CDC 2065-78, CIP 82.96, DSM 4588, Escherichia citrophila, JCM 7580, K. cryocrescens, Kluyvera citrophila, LMG 7859, LMG:7859, NBRC 102467, strain 12993
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.