STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001266615_00594Unannotated protein. (115 aa)    
Predicted Functional Partners:
GCA_001266615_02245
Unannotated protein.
  
     0.773
rcsF
Unannotated protein; Essential component of the Rcs signaling system, which controls transcription of numerous genes. Plays a role in signal transduction from the cell surface to the histidine kinase RcsC. May detect outer membrane defects; Belongs to the RcsF family.
  
     0.773
GCA_001266615_00066
Unannotated protein.
  
     0.771
secM
Unannotated protein; Regulates secA expression by translational coupling of the secM secA operon. Translational pausing at a specific Pro residue 5 residues before the end of the protein may allow disruption of a mRNA repressor helix that normally suppresses secA translation initiation. Belongs to the SecM family.
  
     0.771
GCA_001266615_02128
Unannotated protein.
  
     0.771
GCA_001266615_00174
Unannotated protein.
  
     0.770
GCA_001266615_00293
Unannotated protein.
  
     0.770
GCA_001266615_03170
Unannotated protein.
  
     0.770
GCA_001266615_04291
Unannotated protein.
  
     0.770
GCA_001266615_03313
Unannotated protein.
  
   
 0.769
Your Current Organism:
Kluyvera cryocrescens
NCBI taxonomy Id: 580
Other names: ATCC 33435, CCUG 18767, CDC 2065-78, CIP 82.96, DSM 4588, Escherichia citrophila, JCM 7580, K. cryocrescens, Kluyvera citrophila, LMG 7859, LMG:7859, NBRC 102467, strain 12993
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.