Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_001266615_02354 | GCA_001266615_02356 | GCA_001266615_02354 | GCA_001266615_02356 | Unannotated protein. | Unannotated protein. | 0.935 |
GCA_001266615_02354 | GCA_001266615_02357 | GCA_001266615_02354 | GCA_001266615_02357 | Unannotated protein. | Unannotated protein. | 0.775 |
GCA_001266615_02354 | gfcB | GCA_001266615_02354 | GCA_001266615_02355 | Unannotated protein. | Unannotated protein. | 0.761 |
GCA_001266615_02356 | GCA_001266615_02354 | GCA_001266615_02356 | GCA_001266615_02354 | Unannotated protein. | Unannotated protein. | 0.935 |
GCA_001266615_02356 | GCA_001266615_02357 | GCA_001266615_02356 | GCA_001266615_02357 | Unannotated protein. | Unannotated protein. | 0.985 |
GCA_001266615_02356 | GCA_001266615_03049 | GCA_001266615_02356 | GCA_001266615_03049 | Unannotated protein. | Unannotated protein. | 0.648 |
GCA_001266615_02356 | gfcB | GCA_001266615_02356 | GCA_001266615_02355 | Unannotated protein. | Unannotated protein. | 0.972 |
GCA_001266615_02357 | GCA_001266615_02354 | GCA_001266615_02357 | GCA_001266615_02354 | Unannotated protein. | Unannotated protein. | 0.775 |
GCA_001266615_02357 | GCA_001266615_02356 | GCA_001266615_02357 | GCA_001266615_02356 | Unannotated protein. | Unannotated protein. | 0.985 |
GCA_001266615_02357 | GCA_001266615_03049 | GCA_001266615_02357 | GCA_001266615_03049 | Unannotated protein. | Unannotated protein. | 0.599 |
GCA_001266615_02357 | GCA_001266615_03934 | GCA_001266615_02357 | GCA_001266615_03934 | Unannotated protein. | Unannotated protein. | 0.672 |
GCA_001266615_02357 | aas | GCA_001266615_02357 | GCA_001266615_03302 | Unannotated protein. | Unannotated protein; Plays a role in lysophospholipid acylation. Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3- phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1; In the C-terminal section; belongs to the ATP-dependent AMP-binding enzyme family. | 0.869 |
GCA_001266615_02357 | ddc | GCA_001266615_02357 | GCA_001266615_03101 | Unannotated protein. | Unannotated protein. | 0.590 |
GCA_001266615_02357 | gfcB | GCA_001266615_02357 | GCA_001266615_02355 | Unannotated protein. | Unannotated protein. | 0.967 |
GCA_001266615_02357 | menE | GCA_001266615_02357 | GCA_001266615_02887 | Unannotated protein. | Unannotated protein. | 0.672 |
GCA_001266615_02357 | rplF | GCA_001266615_02357 | GCA_001266615_02671 | Unannotated protein. | Unannotated protein; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.710 |
GCA_001266615_02357 | rpoZ | GCA_001266615_02357 | GCA_001266615_00300 | Unannotated protein. | Unannotated protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.673 |
GCA_001266615_03049 | GCA_001266615_02356 | GCA_001266615_03049 | GCA_001266615_02356 | Unannotated protein. | Unannotated protein. | 0.648 |
GCA_001266615_03049 | GCA_001266615_02357 | GCA_001266615_03049 | GCA_001266615_02357 | Unannotated protein. | Unannotated protein. | 0.599 |
GCA_001266615_03049 | gfcB | GCA_001266615_03049 | GCA_001266615_02355 | Unannotated protein. | Unannotated protein. | 0.735 |
page 1 of 3