STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ompXUnannotated protein. (169 aa)    
Predicted Functional Partners:
skp
Unannotated protein; Belongs to the skp family.
  
 
 
 0.812
ompC
Unannotated protein; Belongs to the Gram-negative porin family.
  
 
 0.799
holE
Unannotated protein.
  
     0.774
GCA_001266615_01089
Unannotated protein.
  
     0.774
GCA_001266615_01292
Unannotated protein.
  
     0.774
GCA_001266615_01002
Unannotated protein.
  
     0.773
GCA_001266615_01615
Unannotated protein.
  
     0.773
tus
Unannotated protein; Trans-acting protein required for termination of DNA replication. Binds to DNA replication terminator sequences (terA to terF) to prevent the passage of replication forks. The termination efficiency will be affected by the affinity of this protein for the terminator sequence; Belongs to the Tus family.
  
     0.772
GCA_001266615_03349
Unannotated protein.
  
     0.771
yciC
Unannotated protein.
  
     0.770
Your Current Organism:
Kluyvera cryocrescens
NCBI taxonomy Id: 580
Other names: ATCC 33435, CCUG 18767, CDC 2065-78, CIP 82.96, DSM 4588, Escherichia citrophila, JCM 7580, K. cryocrescens, Kluyvera citrophila, LMG 7859, LMG:7859, NBRC 102467, strain 12993
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.