Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_001266615_02609 | potE_1 | GCA_001266615_02609 | GCA_001266615_02610 | Unannotated protein. | Unannotated protein; Catalyzes both the uptake and excretion of putrescine. The uptake of putrescine is dependent on the membrane potential and the excretion involves putrescine-ornithine antiporter activity. Belongs to the amino acid-polyamine-organocation (APC) superfamily. Basic amino acid/polyamine antiporter (APA) (TC 2.A.3.2) family. | 0.681 |
GCA_001266615_02609 | speC_1 | GCA_001266615_02609 | GCA_001266615_02611 | Unannotated protein. | Unannotated protein. | 0.703 |
adiA_2 | potE_1 | GCA_001266615_01763 | GCA_001266615_02610 | Unannotated protein. | Unannotated protein; Catalyzes both the uptake and excretion of putrescine. The uptake of putrescine is dependent on the membrane potential and the excretion involves putrescine-ornithine antiporter activity. Belongs to the amino acid-polyamine-organocation (APC) superfamily. Basic amino acid/polyamine antiporter (APA) (TC 2.A.3.2) family. | 0.605 |
amyS | malL | GCA_001266615_00084 | GCA_001266615_01315 | Unannotated protein. | Unannotated protein. | 0.548 |
amyS | malS | GCA_001266615_00084 | GCA_001266615_00570 | Unannotated protein. | Unannotated protein. | 0.820 |
amyS | potE_1 | GCA_001266615_00084 | GCA_001266615_02610 | Unannotated protein. | Unannotated protein; Catalyzes both the uptake and excretion of putrescine. The uptake of putrescine is dependent on the membrane potential and the excretion involves putrescine-ornithine antiporter activity. Belongs to the amino acid-polyamine-organocation (APC) superfamily. Basic amino acid/polyamine antiporter (APA) (TC 2.A.3.2) family. | 0.733 |
amyS | treA | GCA_001266615_00084 | GCA_001266615_04163 | Unannotated protein. | Unannotated protein. | 0.558 |
amyS | tvaI | GCA_001266615_00084 | GCA_001266615_01507 | Unannotated protein. | Unannotated protein. | 0.618 |
ldcC | potE_1 | GCA_001266615_03507 | GCA_001266615_02610 | Unannotated protein. | Unannotated protein; Catalyzes both the uptake and excretion of putrescine. The uptake of putrescine is dependent on the membrane potential and the excretion involves putrescine-ornithine antiporter activity. Belongs to the amino acid-polyamine-organocation (APC) superfamily. Basic amino acid/polyamine antiporter (APA) (TC 2.A.3.2) family. | 0.584 |
malL | amyS | GCA_001266615_01315 | GCA_001266615_00084 | Unannotated protein. | Unannotated protein. | 0.548 |
malL | malS | GCA_001266615_01315 | GCA_001266615_00570 | Unannotated protein. | Unannotated protein. | 0.563 |
malL | potE_1 | GCA_001266615_01315 | GCA_001266615_02610 | Unannotated protein. | Unannotated protein; Catalyzes both the uptake and excretion of putrescine. The uptake of putrescine is dependent on the membrane potential and the excretion involves putrescine-ornithine antiporter activity. Belongs to the amino acid-polyamine-organocation (APC) superfamily. Basic amino acid/polyamine antiporter (APA) (TC 2.A.3.2) family. | 0.733 |
malL | tvaI | GCA_001266615_01315 | GCA_001266615_01507 | Unannotated protein. | Unannotated protein. | 0.623 |
malS | amyS | GCA_001266615_00570 | GCA_001266615_00084 | Unannotated protein. | Unannotated protein. | 0.820 |
malS | malL | GCA_001266615_00570 | GCA_001266615_01315 | Unannotated protein. | Unannotated protein. | 0.563 |
malS | potE_1 | GCA_001266615_00570 | GCA_001266615_02610 | Unannotated protein. | Unannotated protein; Catalyzes both the uptake and excretion of putrescine. The uptake of putrescine is dependent on the membrane potential and the excretion involves putrescine-ornithine antiporter activity. Belongs to the amino acid-polyamine-organocation (APC) superfamily. Basic amino acid/polyamine antiporter (APA) (TC 2.A.3.2) family. | 0.733 |
malS | treA | GCA_001266615_00570 | GCA_001266615_04163 | Unannotated protein. | Unannotated protein. | 0.559 |
malS | tvaI | GCA_001266615_00570 | GCA_001266615_01507 | Unannotated protein. | Unannotated protein. | 0.717 |
potE_1 | GCA_001266615_02609 | GCA_001266615_02610 | GCA_001266615_02609 | Unannotated protein; Catalyzes both the uptake and excretion of putrescine. The uptake of putrescine is dependent on the membrane potential and the excretion involves putrescine-ornithine antiporter activity. Belongs to the amino acid-polyamine-organocation (APC) superfamily. Basic amino acid/polyamine antiporter (APA) (TC 2.A.3.2) family. | Unannotated protein. | 0.681 |
potE_1 | adiA_2 | GCA_001266615_02610 | GCA_001266615_01763 | Unannotated protein; Catalyzes both the uptake and excretion of putrescine. The uptake of putrescine is dependent on the membrane potential and the excretion involves putrescine-ornithine antiporter activity. Belongs to the amino acid-polyamine-organocation (APC) superfamily. Basic amino acid/polyamine antiporter (APA) (TC 2.A.3.2) family. | Unannotated protein. | 0.605 |
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