Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_001266615_00551 | mscS_1 | GCA_001266615_00551 | GCA_001266615_03213 | Unannotated protein. | Unannotated protein. | 0.471 |
fbaA | mscS_1 | GCA_001266615_03212 | GCA_001266615_03213 | Unannotated protein; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | Unannotated protein. | 0.514 |
fbaA | pgk_2 | GCA_001266615_03212 | GCA_001266615_03211 | Unannotated protein; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | Unannotated protein; Belongs to the phosphoglycerate kinase family. | 0.986 |
gcvP | mscS_1 | GCA_001266615_03229 | GCA_001266615_03213 | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Unannotated protein. | 0.712 |
kefB | kefC | GCA_001266615_00371 | GCA_001266615_00671 | Unannotated protein; Pore-forming subunit of a potassium efflux system that confers protection against electrophiles. Catalyzes K(+)/H(+) antiport. | Unannotated protein; Pore-forming subunit of a potassium efflux system that confers protection against electrophiles. Catalyzes K(+)/H(+) antiport. | 0.510 |
kefB | lysX | GCA_001266615_00371 | GCA_001266615_01917 | Unannotated protein; Pore-forming subunit of a potassium efflux system that confers protection against electrophiles. Catalyzes K(+)/H(+) antiport. | Unannotated protein; Belongs to the RimK family. | 0.427 |
kefB | mscS_1 | GCA_001266615_00371 | GCA_001266615_03213 | Unannotated protein; Pore-forming subunit of a potassium efflux system that confers protection against electrophiles. Catalyzes K(+)/H(+) antiport. | Unannotated protein. | 0.408 |
kefC | kefB | GCA_001266615_00671 | GCA_001266615_00371 | Unannotated protein; Pore-forming subunit of a potassium efflux system that confers protection against electrophiles. Catalyzes K(+)/H(+) antiport. | Unannotated protein; Pore-forming subunit of a potassium efflux system that confers protection against electrophiles. Catalyzes K(+)/H(+) antiport. | 0.510 |
kefC | lysX | GCA_001266615_00671 | GCA_001266615_01917 | Unannotated protein; Pore-forming subunit of a potassium efflux system that confers protection against electrophiles. Catalyzes K(+)/H(+) antiport. | Unannotated protein; Belongs to the RimK family. | 0.427 |
kefC | mscS_1 | GCA_001266615_00671 | GCA_001266615_03213 | Unannotated protein; Pore-forming subunit of a potassium efflux system that confers protection against electrophiles. Catalyzes K(+)/H(+) antiport. | Unannotated protein. | 0.408 |
lysX | kefB | GCA_001266615_01917 | GCA_001266615_00371 | Unannotated protein; Belongs to the RimK family. | Unannotated protein; Pore-forming subunit of a potassium efflux system that confers protection against electrophiles. Catalyzes K(+)/H(+) antiport. | 0.427 |
lysX | kefC | GCA_001266615_01917 | GCA_001266615_00671 | Unannotated protein; Belongs to the RimK family. | Unannotated protein; Pore-forming subunit of a potassium efflux system that confers protection against electrophiles. Catalyzes K(+)/H(+) antiport. | 0.427 |
lysX | mscS_1 | GCA_001266615_01917 | GCA_001266615_03213 | Unannotated protein; Belongs to the RimK family. | Unannotated protein. | 0.571 |
mscS_1 | GCA_001266615_00551 | GCA_001266615_03213 | GCA_001266615_00551 | Unannotated protein. | Unannotated protein. | 0.471 |
mscS_1 | fbaA | GCA_001266615_03213 | GCA_001266615_03212 | Unannotated protein. | Unannotated protein; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | 0.514 |
mscS_1 | gcvP | GCA_001266615_03213 | GCA_001266615_03229 | Unannotated protein. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.712 |
mscS_1 | kefB | GCA_001266615_03213 | GCA_001266615_00371 | Unannotated protein. | Unannotated protein; Pore-forming subunit of a potassium efflux system that confers protection against electrophiles. Catalyzes K(+)/H(+) antiport. | 0.408 |
mscS_1 | kefC | GCA_001266615_03213 | GCA_001266615_00671 | Unannotated protein. | Unannotated protein; Pore-forming subunit of a potassium efflux system that confers protection against electrophiles. Catalyzes K(+)/H(+) antiport. | 0.408 |
mscS_1 | lysX | GCA_001266615_03213 | GCA_001266615_01917 | Unannotated protein. | Unannotated protein; Belongs to the RimK family. | 0.571 |
mscS_1 | pgk_2 | GCA_001266615_03213 | GCA_001266615_03211 | Unannotated protein. | Unannotated protein; Belongs to the phosphoglycerate kinase family. | 0.411 |
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