Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_001266615_02127 | GCA_001266615_03616 | GCA_001266615_02127 | GCA_001266615_03616 | Unannotated protein. | Unannotated protein. | 0.576 |
GCA_001266615_02127 | dps | GCA_001266615_02127 | GCA_001266615_02513 | Unannotated protein. | Unannotated protein; During stationary phase, binds the chromosome non- specifically, forming a highly ordered and stable dps-DNA co-crystal within which chromosomal DNA is condensed and protected from diverse damages. It protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction. | 0.880 |
GCA_001266615_02127 | elaB | GCA_001266615_02127 | GCA_001266615_01294 | Unannotated protein. | Unannotated protein. | 0.880 |
GCA_001266615_02127 | yegP | GCA_001266615_02127 | GCA_001266615_03017 | Unannotated protein. | Unannotated protein. | 0.607 |
GCA_001266615_02127 | yjbJ | GCA_001266615_02127 | GCA_001266615_02372 | Unannotated protein. | Unannotated protein; Belongs to the UPF0337 (CsbD) family. | 0.708 |
GCA_001266615_03616 | GCA_001266615_02127 | GCA_001266615_03616 | GCA_001266615_02127 | Unannotated protein. | Unannotated protein. | 0.576 |
GCA_001266615_03616 | blc | GCA_001266615_03616 | GCA_001266615_02921 | Unannotated protein. | Unannotated protein; Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids. | 0.413 |
GCA_001266615_03616 | dps | GCA_001266615_03616 | GCA_001266615_02513 | Unannotated protein. | Unannotated protein; During stationary phase, binds the chromosome non- specifically, forming a highly ordered and stable dps-DNA co-crystal within which chromosomal DNA is condensed and protected from diverse damages. It protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction. | 0.414 |
GCA_001266615_03616 | elaB | GCA_001266615_03616 | GCA_001266615_01294 | Unannotated protein. | Unannotated protein. | 0.428 |
GCA_001266615_03616 | fhuA_2 | GCA_001266615_03616 | GCA_001266615_03617 | Unannotated protein. | Unannotated protein. | 0.465 |
GCA_001266615_03616 | ycgR | GCA_001266615_03616 | GCA_001266615_03615 | Unannotated protein. | Unannotated protein; Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)-dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility. | 0.513 |
GCA_001266615_03616 | yegP | GCA_001266615_03616 | GCA_001266615_03017 | Unannotated protein. | Unannotated protein. | 0.725 |
GCA_001266615_03616 | yjbJ | GCA_001266615_03616 | GCA_001266615_02372 | Unannotated protein. | Unannotated protein; Belongs to the UPF0337 (CsbD) family. | 0.581 |
blc | GCA_001266615_03616 | GCA_001266615_02921 | GCA_001266615_03616 | Unannotated protein; Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids. | Unannotated protein. | 0.413 |
dps | GCA_001266615_02127 | GCA_001266615_02513 | GCA_001266615_02127 | Unannotated protein; During stationary phase, binds the chromosome non- specifically, forming a highly ordered and stable dps-DNA co-crystal within which chromosomal DNA is condensed and protected from diverse damages. It protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction. | Unannotated protein. | 0.880 |
dps | GCA_001266615_03616 | GCA_001266615_02513 | GCA_001266615_03616 | Unannotated protein; During stationary phase, binds the chromosome non- specifically, forming a highly ordered and stable dps-DNA co-crystal within which chromosomal DNA is condensed and protected from diverse damages. It protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction. | Unannotated protein. | 0.414 |
dps | elaB | GCA_001266615_02513 | GCA_001266615_01294 | Unannotated protein; During stationary phase, binds the chromosome non- specifically, forming a highly ordered and stable dps-DNA co-crystal within which chromosomal DNA is condensed and protected from diverse damages. It protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction. | Unannotated protein. | 0.834 |
dps | yjbJ | GCA_001266615_02513 | GCA_001266615_02372 | Unannotated protein; During stationary phase, binds the chromosome non- specifically, forming a highly ordered and stable dps-DNA co-crystal within which chromosomal DNA is condensed and protected from diverse damages. It protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction. | Unannotated protein; Belongs to the UPF0337 (CsbD) family. | 0.493 |
elaB | GCA_001266615_02127 | GCA_001266615_01294 | GCA_001266615_02127 | Unannotated protein. | Unannotated protein. | 0.880 |
elaB | GCA_001266615_03616 | GCA_001266615_01294 | GCA_001266615_03616 | Unannotated protein. | Unannotated protein. | 0.428 |
page 1 of 2