Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
aas | nepI_2 | GCA_001266615_03302 | GCA_001266615_03638 | Unannotated protein; Plays a role in lysophospholipid acylation. Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3- phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1; In the C-terminal section; belongs to the ATP-dependent AMP-binding enzyme family. | Unannotated protein. | 0.453 |
aas | pheA | GCA_001266615_03302 | GCA_001266615_02187 | Unannotated protein; Plays a role in lysophospholipid acylation. Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3- phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1; In the C-terminal section; belongs to the ATP-dependent AMP-binding enzyme family. | Unannotated protein. | 0.571 |
aas | tyrA | GCA_001266615_03302 | GCA_001266615_02185 | Unannotated protein; Plays a role in lysophospholipid acylation. Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3- phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1; In the C-terminal section; belongs to the ATP-dependent AMP-binding enzyme family. | Unannotated protein. | 0.516 |
metH | nepI_2 | GCA_001266615_02342 | GCA_001266615_03638 | Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Unannotated protein. | 0.523 |
metH | pheA | GCA_001266615_02342 | GCA_001266615_02187 | Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Unannotated protein. | 0.439 |
metH | tyrA | GCA_001266615_02342 | GCA_001266615_02185 | Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Unannotated protein. | 0.549 |
nepI_2 | aas | GCA_001266615_03638 | GCA_001266615_03302 | Unannotated protein. | Unannotated protein; Plays a role in lysophospholipid acylation. Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3- phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1; In the C-terminal section; belongs to the ATP-dependent AMP-binding enzyme family. | 0.453 |
nepI_2 | metH | GCA_001266615_03638 | GCA_001266615_02342 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.523 |
nepI_2 | pheA | GCA_001266615_03638 | GCA_001266615_02187 | Unannotated protein. | Unannotated protein. | 0.457 |
nepI_2 | thcD | GCA_001266615_03638 | GCA_001266615_02017 | Unannotated protein. | Unannotated protein; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.441 |
nepI_2 | tyrA | GCA_001266615_03638 | GCA_001266615_02185 | Unannotated protein. | Unannotated protein. | 0.423 |
nepI_2 | ureR_3 | GCA_001266615_03638 | GCA_001266615_03637 | Unannotated protein. | Unannotated protein. | 0.666 |
pheA | aas | GCA_001266615_02187 | GCA_001266615_03302 | Unannotated protein. | Unannotated protein; Plays a role in lysophospholipid acylation. Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3- phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1; In the C-terminal section; belongs to the ATP-dependent AMP-binding enzyme family. | 0.571 |
pheA | metH | GCA_001266615_02187 | GCA_001266615_02342 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.439 |
pheA | nepI_2 | GCA_001266615_02187 | GCA_001266615_03638 | Unannotated protein. | Unannotated protein. | 0.457 |
pheA | tyrA | GCA_001266615_02187 | GCA_001266615_02185 | Unannotated protein. | Unannotated protein. | 0.992 |
thcD | nepI_2 | GCA_001266615_02017 | GCA_001266615_03638 | Unannotated protein; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Unannotated protein. | 0.441 |
tyrA | aas | GCA_001266615_02185 | GCA_001266615_03302 | Unannotated protein. | Unannotated protein; Plays a role in lysophospholipid acylation. Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3- phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1; In the C-terminal section; belongs to the ATP-dependent AMP-binding enzyme family. | 0.516 |
tyrA | metH | GCA_001266615_02185 | GCA_001266615_02342 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.549 |
tyrA | nepI_2 | GCA_001266615_02185 | GCA_001266615_03638 | Unannotated protein. | Unannotated protein. | 0.423 |
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