Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_001266615_00132 | GCA_001266615_03387 | GCA_001266615_00132 | GCA_001266615_03387 | Unannotated protein. | Unannotated protein. | 0.825 |
GCA_001266615_00132 | cysA_3 | GCA_001266615_00132 | GCA_001266615_03885 | Unannotated protein. | Unannotated protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. | 0.923 |
GCA_001266615_00132 | cysC | GCA_001266615_00132 | GCA_001266615_03389 | Unannotated protein. | Unannotated protein; Catalyzes the synthesis of activated sulfate. | 0.849 |
GCA_001266615_00132 | cysH | GCA_001266615_00132 | GCA_001266615_03384 | Unannotated protein. | Unannotated protein; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.722 |
GCA_001266615_00132 | cysJ | GCA_001266615_00132 | GCA_001266615_03382 | Unannotated protein. | Unannotated protein; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH -> FAD -> FMN to the hemoprotein component. Belongs to the NADPH-dependent sulphite reductase flavoprotein subunit CysJ family. In the N-terminal section; belongs to the flavodoxin family. | 0.936 |
GCA_001266615_00132 | cysN | GCA_001266615_00132 | GCA_001266615_03388 | Unannotated protein. | Unannotated protein; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.912 |
GCA_001266615_00132 | cysP | GCA_001266615_00132 | GCA_001266615_03882 | Unannotated protein. | Unannotated protein. | 0.938 |
GCA_001266615_00132 | cysW_1 | GCA_001266615_00132 | GCA_001266615_03884 | Unannotated protein. | Unannotated protein. | 0.829 |
GCA_001266615_00132 | cysW_2 | GCA_001266615_00132 | GCA_001266615_03883 | Unannotated protein. | Unannotated protein; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.843 |
GCA_001266615_00132 | potH_1 | GCA_001266615_00132 | GCA_001266615_02802 | Unannotated protein. | Unannotated protein. | 0.843 |
GCA_001266615_03387 | GCA_001266615_00132 | GCA_001266615_03387 | GCA_001266615_00132 | Unannotated protein. | Unannotated protein. | 0.825 |
GCA_001266615_03387 | cysA_3 | GCA_001266615_03387 | GCA_001266615_03885 | Unannotated protein. | Unannotated protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. | 0.979 |
GCA_001266615_03387 | cysC | GCA_001266615_03387 | GCA_001266615_03389 | Unannotated protein. | Unannotated protein; Catalyzes the synthesis of activated sulfate. | 0.999 |
GCA_001266615_03387 | cysH | GCA_001266615_03387 | GCA_001266615_03384 | Unannotated protein. | Unannotated protein; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.949 |
GCA_001266615_03387 | cysJ | GCA_001266615_03387 | GCA_001266615_03382 | Unannotated protein. | Unannotated protein; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH -> FAD -> FMN to the hemoprotein component. Belongs to the NADPH-dependent sulphite reductase flavoprotein subunit CysJ family. In the N-terminal section; belongs to the flavodoxin family. | 0.970 |
GCA_001266615_03387 | cysN | GCA_001266615_03387 | GCA_001266615_03388 | Unannotated protein. | Unannotated protein; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.999 |
GCA_001266615_03387 | cysP | GCA_001266615_03387 | GCA_001266615_03882 | Unannotated protein. | Unannotated protein. | 0.974 |
GCA_001266615_03387 | cysW_1 | GCA_001266615_03387 | GCA_001266615_03884 | Unannotated protein. | Unannotated protein. | 0.979 |
GCA_001266615_03387 | cysW_2 | GCA_001266615_03387 | GCA_001266615_03883 | Unannotated protein. | Unannotated protein; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.945 |
GCA_001266615_03387 | potH_1 | GCA_001266615_03387 | GCA_001266615_02802 | Unannotated protein. | Unannotated protein. | 0.945 |
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