Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_001266615_04245 | fumA | GCA_001266615_04245 | GCA_001266615_00988 | Unannotated protein. | Unannotated protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.530 |
GCA_001266615_04245 | fumB | GCA_001266615_04245 | GCA_001266615_01134 | Unannotated protein. | Unannotated protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.530 |
GCA_001266615_04245 | mdoD | GCA_001266615_04245 | GCA_001266615_04247 | Unannotated protein. | Unannotated protein; Probably involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans (OPGs). Belongs to the OpgD/OpgG family. | 0.575 |
GCA_001266615_04245 | pcaG | GCA_001266615_04245 | GCA_001266615_04243 | Unannotated protein. | Unannotated protein. | 0.473 |
GCA_001266615_04245 | pcaH_1 | GCA_001266615_04245 | GCA_001266615_04244 | Unannotated protein. | Unannotated protein. | 0.473 |
GCA_001266615_04245 | pnbA | GCA_001266615_04245 | GCA_001266615_04246 | Unannotated protein. | Unannotated protein; Belongs to the type-B carboxylesterase/lipase family. | 0.673 |
fumA | GCA_001266615_04245 | GCA_001266615_00988 | GCA_001266615_04245 | Unannotated protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Unannotated protein. | 0.530 |
fumA | fumB | GCA_001266615_00988 | GCA_001266615_01134 | Unannotated protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Unannotated protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.907 |
fumB | GCA_001266615_04245 | GCA_001266615_01134 | GCA_001266615_04245 | Unannotated protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Unannotated protein. | 0.530 |
fumB | fumA | GCA_001266615_01134 | GCA_001266615_00988 | Unannotated protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Unannotated protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.907 |
mdoD | GCA_001266615_04245 | GCA_001266615_04247 | GCA_001266615_04245 | Unannotated protein; Probably involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans (OPGs). Belongs to the OpgD/OpgG family. | Unannotated protein. | 0.575 |
mdoD | pnbA | GCA_001266615_04247 | GCA_001266615_04246 | Unannotated protein; Probably involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans (OPGs). Belongs to the OpgD/OpgG family. | Unannotated protein; Belongs to the type-B carboxylesterase/lipase family. | 0.612 |
pcaG | GCA_001266615_04245 | GCA_001266615_04243 | GCA_001266615_04245 | Unannotated protein. | Unannotated protein. | 0.473 |
pcaG | pcaH_1 | GCA_001266615_04243 | GCA_001266615_04244 | Unannotated protein. | Unannotated protein. | 0.998 |
pcaH_1 | GCA_001266615_04245 | GCA_001266615_04244 | GCA_001266615_04245 | Unannotated protein. | Unannotated protein. | 0.473 |
pcaH_1 | pcaG | GCA_001266615_04244 | GCA_001266615_04243 | Unannotated protein. | Unannotated protein. | 0.998 |
pnbA | GCA_001266615_04245 | GCA_001266615_04246 | GCA_001266615_04245 | Unannotated protein; Belongs to the type-B carboxylesterase/lipase family. | Unannotated protein. | 0.673 |
pnbA | mdoD | GCA_001266615_04246 | GCA_001266615_04247 | Unannotated protein; Belongs to the type-B carboxylesterase/lipase family. | Unannotated protein; Probably involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans (OPGs). Belongs to the OpgD/OpgG family. | 0.612 |