Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
potA_2 | potB | GCA_001266615_00270 | GCA_001266615_00271 | Unannotated protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. | Unannotated protein. | 0.999 |
potA_2 | potF_1 | GCA_001266615_00270 | GCA_001266615_04267 | Unannotated protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. | Unannotated protein. | 0.820 |
potA_2 | potH_3 | GCA_001266615_00270 | GCA_001266615_01921 | Unannotated protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. | Unannotated protein. | 0.921 |
potA_2 | ydcU | GCA_001266615_00270 | GCA_001266615_04269 | Unannotated protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. | Unannotated protein. | 0.917 |
potA_2 | ydcV_1 | GCA_001266615_00270 | GCA_001266615_00272 | Unannotated protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. | Unannotated protein. | 0.999 |
potA_2 | ydcV_2 | GCA_001266615_00270 | GCA_001266615_04270 | Unannotated protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. | Unannotated protein. | 0.882 |
potA_2 | ydcV_3 | GCA_001266615_00270 | GCA_001266615_01922 | Unannotated protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. | Unannotated protein. | 0.893 |
potA_3 | potB | GCA_001266615_04268 | GCA_001266615_00271 | Unannotated protein; Belongs to the ABC transporter superfamily. | Unannotated protein. | 0.949 |
potA_3 | potF_1 | GCA_001266615_04268 | GCA_001266615_04267 | Unannotated protein; Belongs to the ABC transporter superfamily. | Unannotated protein. | 0.994 |
potA_3 | potH_3 | GCA_001266615_04268 | GCA_001266615_01921 | Unannotated protein; Belongs to the ABC transporter superfamily. | Unannotated protein. | 0.957 |
potA_3 | prr | GCA_001266615_04268 | GCA_001266615_04271 | Unannotated protein; Belongs to the ABC transporter superfamily. | Unannotated protein; Catalyzes the oxidation 4-aminobutanal (gamma- aminobutyraldehyde) to 4-aminobutanoate (gamma-aminobutyrate or GABA). This is the second step in one of two pathways for putrescine degradation, where putrescine is converted into 4-aminobutanoate via 4- aminobutanal. Also functions as a 5-aminopentanal dehydrogenase in a a L-lysine degradation pathway to succinate that proceeds via cadaverine, glutarate and L-2-hydroxyglutarate. | 0.781 |
potA_3 | ydcU | GCA_001266615_04268 | GCA_001266615_04269 | Unannotated protein; Belongs to the ABC transporter superfamily. | Unannotated protein. | 0.992 |
potA_3 | ydcV_1 | GCA_001266615_04268 | GCA_001266615_00272 | Unannotated protein; Belongs to the ABC transporter superfamily. | Unannotated protein. | 0.908 |
potA_3 | ydcV_2 | GCA_001266615_04268 | GCA_001266615_04270 | Unannotated protein; Belongs to the ABC transporter superfamily. | Unannotated protein. | 0.992 |
potA_3 | ydcV_3 | GCA_001266615_04268 | GCA_001266615_01922 | Unannotated protein; Belongs to the ABC transporter superfamily. | Unannotated protein. | 0.894 |
potA_4 | potB | GCA_001266615_01920 | GCA_001266615_00271 | Unannotated protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | Unannotated protein. | 0.956 |
potA_4 | potF_1 | GCA_001266615_01920 | GCA_001266615_04267 | Unannotated protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | Unannotated protein. | 0.837 |
potA_4 | potH_3 | GCA_001266615_01920 | GCA_001266615_01921 | Unannotated protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | Unannotated protein. | 0.993 |
potA_4 | ydcU | GCA_001266615_01920 | GCA_001266615_04269 | Unannotated protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | Unannotated protein. | 0.950 |
potA_4 | ydcV_1 | GCA_001266615_01920 | GCA_001266615_00272 | Unannotated protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | Unannotated protein. | 0.924 |
page 1 of 4