STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KZD12605.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RelE toxin family. (105 aa)    
Predicted Functional Partners:
KZD12604.1
Addiction module antidote protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.992
putA
Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
  
 
 0.950
KZD03077.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.931
KZD12608.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.884
KZD07367.1
CopG family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.876
KZD12606.1
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
       0.773
KZD03078.1
Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.684
KZD11911.1
Addiction module antitoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.681
KZD12602.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.581
KZD12603.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.581
Your Current Organism:
Oceanibaculum pacificum
NCBI taxonomy Id: 580166
Other names: CCTCC AB 209059, LMG 24859, LMG:24859, MCCC 1A02656, O. pacificum, Oceanibaculum pacificum Dong et al. 2010, Rhodospirillaceae bacterium MC2UP-L3, strain LMC2up-L3, strain MC2UP-L3
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