STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KZD08967.13-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (284 aa)    
Predicted Functional Partners:
KZD08969.1
3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  0.993
KZD08965.1
Thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.975
KZD08964.1
Nucleic acid-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.963
KZD08968.1
enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.936
KZD09516.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.925
KZD08966.1
acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.917
KZD08340.1
beta-ketoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.912
KZD11949.1
beta-ketoacyl-ACP reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
  0.912
KZD03417.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.912
KZD00604.1
3-hydroxybutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.912
Your Current Organism:
Oceanibaculum pacificum
NCBI taxonomy Id: 580166
Other names: CCTCC AB 209059, LMG 24859, LMG:24859, MCCC 1A02656, O. pacificum, Oceanibaculum pacificum Dong et al. 2010, Rhodospirillaceae bacterium MC2UP-L3, strain LMC2up-L3, strain MC2UP-L3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.