STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tthe_0286KEGG: csc:Csac_2629 hypothetical protein. (185 aa)    
Predicted Functional Partners:
Tthe_0285
KEGG: csc:Csac_2630 hypothetical protein.
       0.796
Tthe_0287
SMART: SAF domain protein; KEGG: dsy:DSY0060 hypothetical protein.
       0.794
Tthe_0281
PFAM: type II secretion system protein E; KEGG: csc:Csac_2636 type II secretion system protein E.
       0.590
Tthe_0284
Hypothetical protein.
       0.564
Tthe_0283
PFAM: Type II secretion system F domain; KEGG: cac:CAC1978 hypothetical protein.
       0.562
Tthe_0280
KEGG: csc:Csac_2637 hypothetical protein.
       0.548
Tthe_0282
KEGG: aoe:Clos_1906 hypothetical protein.
       0.547
Tthe_0279
KEGG: tex:Teth514_0718 hypothetical protein.
       0.541
Your Current Organism:
Thermoanaerobacterium thermosaccharolyticum
NCBI taxonomy Id: 580327
Other names: T. thermosaccharolyticum DSM 571, Thermoanaerobacterium thermosaccharolyticum DSM 571, Thermoanaerobacterium thermosaccharolyticum str. DSM 571, Thermoanaerobacterium thermosaccharolyticum strain DSM 571
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.