STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tthe_0471PFAM: protein of unknown function DUF214; KEGG: tpd:Teth39_2013 hypothetical protein. (390 aa)    
Predicted Functional Partners:
Tthe_0469
KEGG: tex:Teth514_0198 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: biotin/lipoyl attachment domain-containing protein; secretion protein HlyD family protein.
 
 
 0.999
Tthe_0470
KEGG: tpd:Teth39_2014 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.999
Tthe_1482
ABC transporter related; KEGG: eel:EUBELI_01521 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.986
Tthe_2313
ABC transporter related; KEGG: eel:EUBELI_01521 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.986
Tthe_2315
KEGG: cdl:CDR20291_0341 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.986
Tthe_1006
KEGG: cac:CAC0822 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.974
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
    
 0.854
Tthe_2576
KEGG: ckr:CKR_0994 hypothetical protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.825
Tthe_2174
KEGG: tpd:Teth39_1763 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
    0.806
Tthe_2572
KEGG: mta:Moth_2322 secretion protein HlyD; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 0.789
Your Current Organism:
Thermoanaerobacterium thermosaccharolyticum
NCBI taxonomy Id: 580327
Other names: T. thermosaccharolyticum DSM 571, Thermoanaerobacterium thermosaccharolyticum DSM 571, Thermoanaerobacterium thermosaccharolyticum str. DSM 571, Thermoanaerobacterium thermosaccharolyticum strain DSM 571
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