STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tthe_0827Transcriptional regulator, AbrB family; KEGG: swo:Swol_1976 regulators of stationary/sporulation gene expression; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein. (91 aa)    
Predicted Functional Partners:
Tthe_0828
KEGG: swo:Swol_1975 hypothetical protein; PFAM: PilT protein domain protein; SMART: Nucleotide binding protein PINc.
 
    0.948
Tthe_0178
Manually curated; PFAM: PilT protein domain protein; KEGG: swo:Swol_1975 hypothetical protein; SMART: Nucleotide binding protein PINc.
 
    0.782
Tthe_2676
Manually curated; PFAM: PilT protein domain protein; KEGG: swo:Swol_1975 hypothetical protein; SMART: Nucleotide binding protein PINc.
 
    0.782
Tthe_0801
KEGG: cth:Cthe_1620 hypothetical protein; PFAM: PilT protein domain protein; SMART: Nucleotide binding protein PINc.
 
    0.781
Tthe_1871
PFAM: plasmid stabilization system; KEGG: tpd:Teth39_1670 addiction module antitoxin.
 
   
 0.623
Tthe_2385
PFAM: plasmid stabilization system; KEGG: tte:TTE2029 hypothetical protein.
 
   
 0.561
Tthe_0826
PFAM: Domain of unknown function DUF1848; KEGG: tpd:Teth39_0690 hypothetical protein.
       0.468
Tthe_0869
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
     0.425
Your Current Organism:
Thermoanaerobacterium thermosaccharolyticum
NCBI taxonomy Id: 580327
Other names: T. thermosaccharolyticum DSM 571, Thermoanaerobacterium thermosaccharolyticum DSM 571, Thermoanaerobacterium thermosaccharolyticum str. DSM 571, Thermoanaerobacterium thermosaccharolyticum strain DSM 571
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.