STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tthe_0982Xylan 1,4-beta-xylosidase; KEGG: dge:Dgeo_2690 glycoside hydrolase family protein; PFAM: glycoside hydrolase family 52. (680 aa)    
Predicted Functional Partners:
Tthe_0983
Xylan 1,4-beta-xylosidase; KEGG: dth:DICTH_1792 beta-xylosidase; PFAM: glycoside hydrolase family 39.
 
  
  0.970
Tthe_0660
PFAM: glycoside hydrolase family 39; KEGG: csc:Csac_2404 glycoside hydrolase family protein.
    
  0.901
Tthe_0666
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
  
  
  0.839
Tthe_2397
PFAM: glycoside hydrolase family 4; KEGG: ate:Athe_2028 glycoside hydrolase family 4.
     
  0.800
uxaC
KEGG: tte:TTE1939 glucuronate isomerase; PFAM: Glucuronate isomerase.
     
  0.800
Tthe_2424
PFAM: glycoside hydrolase family 4; KEGG: cpy:Cphy_2848 glycoside hydrolase family protein.
     
  0.800
Tthe_0981
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: str:Sterm_4054 oxidoreductase domain protein.
     
 0.679
Tthe_0984
Cephalosporin-C deacetylase; KEGG: cce:Ccel_0210 acetyl xylan esterase; PFAM: Acetyl xylan esterase.
 
     0.678
Tthe_1048
KEGG: sth:STH291 hypothetical protein; related to photosystem II stability/assembly factor-like protein.
  
     0.637
Tthe_0980
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bcl:ABC0605 oxidoreductase.
     
 0.628
Your Current Organism:
Thermoanaerobacterium thermosaccharolyticum
NCBI taxonomy Id: 580327
Other names: T. thermosaccharolyticum DSM 571, Thermoanaerobacterium thermosaccharolyticum DSM 571, Thermoanaerobacterium thermosaccharolyticum str. DSM 571, Thermoanaerobacterium thermosaccharolyticum strain DSM 571
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