STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tthe_1045KEGG: tpd:Teth39_1525 hypothetical protein. (172 aa)    
Predicted Functional Partners:
Tthe_1056
PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: tex:Teth514_2188 single-stranded DNA-binding protein.
 
     0.795
Tthe_2689
KEGG: tpd:Teth39_0100 primosome, DnaD subunit; TIGRFAM: primosome, DnaD subunit; PFAM: DnaD and phage-associated region.
  
     0.765
Tthe_2690
SMART: AAA ATPase; KEGG: tex:Teth514_2347 DNA replication protein DnaC.
  
     0.692
Tthe_0111
KEGG: tex:Teth514_0070 hypothetical protein.
  
     0.688
Tthe_1799
Protein of unknown function DUF710; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.
  
     0.655
Tthe_1811
KEGG: tpd:Teth39_0761 hypothetical protein.
  
     0.647
Tthe_0206
Peptidoglycan-binding lysin domain; KEGG: tpd:Teth39_0175 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM.
  
     0.645
Tthe_1046
PFAM: small acid-soluble spore protein alpha/beta type; KEGG: tpd:Teth39_1524 small acid-soluble spore protein, alpha/beta type.
 
     0.622
Tthe_1791
KEGG: tex:Teth514_2040 hypothetical protein.
  
     0.587
Tthe_1577
PFAM: NUDIX hydrolase; KEGG: tte:TTE1129 NTP pyrophosphohydrolase including oxidative damage repair enzyme.
  
     0.577
Your Current Organism:
Thermoanaerobacterium thermosaccharolyticum
NCBI taxonomy Id: 580327
Other names: T. thermosaccharolyticum DSM 571, Thermoanaerobacterium thermosaccharolyticum DSM 571, Thermoanaerobacterium thermosaccharolyticum str. DSM 571, Thermoanaerobacterium thermosaccharolyticum strain DSM 571
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.