STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tthe_1069KEGG: amt:Amet_4332 heptaprenyl diphosphate synthase component I; manually curated; PFAM: Heptaprenyl diphosphate synthase component I. (181 aa)    
Predicted Functional Partners:
Tthe_0702
PFAM: protein of unknown function DUF1312; KEGG: tpd:Teth39_2118 hypothetical protein.
 
    0.910
Tthe_1070
PFAM: Polyprenyl synthetase; KEGG: tex:Teth514_0672 polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
 
  
 0.876
Tthe_0701
ApbE family lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
 
   
 0.816
Tthe_1068
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; TQO small subunit DoxD; KEGG: tte:TTE2486 NADH dehydrogenase, FAD-containing subunit.
 
     0.783
Tthe_0010
KEGG: tpd:Teth39_0241 FMN-binding domain-containing protein; PFAM: FMN-binding domain protein; SMART: FMN-binding domain protein.
 
     0.760
Tthe_0742
PFAM: protein of unknown function DUF1312; KEGG: ckr:CKR_2230 hypothetical protein.
 
    0.698
rnfC
Electron transport complex, RnfABCDGE type, C subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.
 
     0.691
rnfD
Electron transport complex, RnfABCDGE type, D subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.
 
     0.648
rnfB
Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
 
     0.594
Tthe_0341
PFAM: UbiA prenyltransferase; KEGG: cth:Cthe_3041 1,4-dihydroxy-2-naphthoate octaprenyltransferase.
 
   
 0.571
Your Current Organism:
Thermoanaerobacterium thermosaccharolyticum
NCBI taxonomy Id: 580327
Other names: T. thermosaccharolyticum DSM 571, Thermoanaerobacterium thermosaccharolyticum DSM 571, Thermoanaerobacterium thermosaccharolyticum str. DSM 571, Thermoanaerobacterium thermosaccharolyticum strain DSM 571
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