STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tthe_1195Sporulation protein YqfD; KEGG: tpd:Teth39_1370 putative stage IV sporulation YqfD; TIGRFAM: sporulation protein YqfD; PFAM: putative stage IV sporulation YqfD. (401 aa)    
Predicted Functional Partners:
Tthe_1194
Sporulation protein YqfC; KEGG: tpd:Teth39_1371 hypothetical protein; TIGRFAM: sporulation protein YqfC; PFAM: protein of unknown function DUF1429.
 
  
 0.983
Tthe_1196
PFAM: PhoH family protein; K Homology, type 1, subgroup; KEGG: tte:TTE0970 phosphate starvation-inducible protein PhoH, ATPase.
       0.853
Tthe_1197
TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase 7TM extracellular region; metal-dependent phosphohydrolase 7TM intracellular region; metal-dependent phosphohydrolase HD sub domain; KEGG: tex:Teth514_1341 metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region.
       0.853
ybeY
Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
       0.853
Tthe_1199
KEGG: amt:Amet_3030 diacylglycerol kinase; PFAM: diacylglycerol kinase; phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related.
       0.853
Tthe_1504
Sporulation integral membrane protein YlbJ; KEGG: tpd:Teth39_1298 nucleoside recognition domain-containing protein; TIGRFAM: sporulation integral membrane protein YlbJ; PFAM: nucleoside recognition domain protein.
 
   
 0.828
Tthe_2511
TIGRFAM: sporulation transcriptional regulator SpoIIID; KEGG: tte:TTE0170 transcription regulator of sigma-E/sigma-K-dependent gene spoIIID.
  
   
 0.825
Tthe_0263
KEGG: tpd:Teth39_0252 YabP family protein; TIGRFAM: sporulation protein YabP; PFAM: YabP family protein.
 
   
 0.815
Tthe_0214
KEGG: tex:Teth514_0606 hypothetical protein; TIGRFAM: stage II sporulation protein R; PFAM: Sporulation stage II protein R.
  
  
 0.798
Tthe_1759
sigma-E processing peptidase SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family.
  
   
 0.794
Your Current Organism:
Thermoanaerobacterium thermosaccharolyticum
NCBI taxonomy Id: 580327
Other names: T. thermosaccharolyticum DSM 571, Thermoanaerobacterium thermosaccharolyticum DSM 571, Thermoanaerobacterium thermosaccharolyticum str. DSM 571, Thermoanaerobacterium thermosaccharolyticum strain DSM 571
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