STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tthe_1283KEGG: tte:TTE1268 hypothetical protein. (213 aa)    
Predicted Functional Partners:
Tthe_1284
KEGG: tte:TTE1269 hypothetical protein.
  
  
 0.819
Tthe_1286
PFAM: Late competence development protein ComFB; KEGG: tpd:Teth39_1076 hypothetical protein.
  
    0.805
Tthe_1287
KEGG: tpd:Teth39_1077 Tfp pilus assembly protein ATPase PilM-like protein.
  
  
 0.804
Tthe_1289
KEGG: tpd:Teth39_1079 hypothetical protein.
  
  
 0.801
Tthe_1279
PFAM: Type II secretion system F domain; KEGG: tpd:Teth39_1069 type II secretion system protein.
  
  
 0.798
Tthe_1285
KEGG: tte:TTE1270 hypothetical protein.
     
 0.795
Tthe_1281
Prepilin peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
  
  
 0.788
Tthe_1288
PFAM: Fimbrial assembly family protein; KEGG: tex:Teth514_1515 fimbrial assembly family protein.
  
  
 0.777
Tthe_1282
KEGG: tte:TTE1267 hypothetical protein.
       0.768
Tthe_1277
KEGG: tpd:Teth39_1067 type II secretion system protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase.
  
 
 0.763
Your Current Organism:
Thermoanaerobacterium thermosaccharolyticum
NCBI taxonomy Id: 580327
Other names: T. thermosaccharolyticum DSM 571, Thermoanaerobacterium thermosaccharolyticum DSM 571, Thermoanaerobacterium thermosaccharolyticum str. DSM 571, Thermoanaerobacterium thermosaccharolyticum strain DSM 571
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.